RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 HGSO14964 777 aaPredicted RBP24.28■■□□□ 1.48
PTCH1-210ENST00000468211 TMEM253P0C7T8 217 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 CA4P22748 312 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 PPIDQ08752 370 aaKnown RBP24.28■■□□□ 1.48
PTCH1-210ENST00000468211 SQSTM1Q13501 440 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 PEX6Q13608 980 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 LRP8Q14114 963 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 SFRP1Q8N474 314 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 OR4D9Q8NGE8 314 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 SLC35G2Q8TBE7 412 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 JPH3Q8WXH2 748 aaPredicted RBP24.28■■□□□ 1.48
PTCH1-210ENST00000468211 SGF29Q96ES7 293 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 CHP1Q99653 195 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 BRD8Q9H0E9 1235 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 HEY1Q9Y5J3 304 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 LRRD1A4D1F6 860 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 THRAP10827 490 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 FASLGP48023 281 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 IFI35P80217 286 aaPredicted RBP24.27■■□□□ 1.48
PTCH1-210ENST00000468211 GALNT3Q14435 633 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 MANEAQ5SRI9 462 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.27■■□□□ 1.48
PTCH1-210ENST00000468211 NPNTQ6UXI9 565 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 B4GALNT4Q76KP1 1039 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 CHST15Q7LFX5 561 aaPredicted RBP24.27■■□□□ 1.48
PTCH1-210ENST00000468211 LYSMD3Q7Z3D4 306 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 OR8K1Q8NGG5 319 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 MLPHQ9BV36 600 aaPredicted RBP24.27■■□□□ 1.48
PTCH1-210ENST00000468211 FAM83DQ9H4H8 585 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 HAUS2Q9NVX0 235 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 AKAP7Q9P0M2 348 aaPredicted RBP24.27■■□□□ 1.48
PTCH1-210ENST00000468211 VPS18Q9P253 973 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 TBC1D29Q9UFV1 150 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 PCDHGA4Q9Y5G9 962 aa24.27■■□□□ 1.48
PTCH1-210ENST00000468211 ZW10O43264 779 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 ZNF648Q5T619 568 aaPredicted RBP24.26■■□□□ 1.47
PTCH1-210ENST00000468211 SLC9A4Q6AI14 798 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 KDELC2Q7Z4H8 507 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 RAVER1Q8IY67 606 aaKnown RBP24.26■■□□□ 1.47
PTCH1-210ENST00000468211 EXTL1Q92935 676 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 TRIB3Q96RU7 358 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 B3GNT4Q9C0J1 378 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 ARFGAP3Q9NP61 516 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 SPTLC3Q9NUV7 552 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 OCIAD1Q9NX40 245 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 SEPT10Q9P0V9 454 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 KCNK6Q9Y257 313 aa24.26■■□□□ 1.47
PTCH1-210ENST00000468211 SSU72P8A0A1W2PR75 194 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 B8ZZF3 427 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.25■■□□□ 1.47
PTCH1-210ENST00000468211 PIRTP0C851 137 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 CD82P27701 267 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 CYP4F2P78329 520 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 TRA2AQ13595 282 aaKnown RBP eCLIP24.25■■□□□ 1.47
PTCH1-210ENST00000468211 TMEM164Q5U3C3 297 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 ART4Q93070 314 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 ZNF830Q96NB3 372 aaPredicted RBP24.25■■□□□ 1.47
PTCH1-210ENST00000468211 TAAR9Q96RI9 348 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 DEF6Q9H4E7 631 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 PKD2L2Q9NZM6 624 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 LCMT1Q9UIC8 334 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 PCDHB11Q9Y5F2 797 aa24.25■■□□□ 1.47
PTCH1-210ENST00000468211 FLNBO75369 2602 aaKnown RBP24.24■■□□□ 1.47
PTCH1-210ENST00000468211 A6NCN8 305 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 PYCARD-AS1I3L0S3 204 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 AKR1B10O60218 316 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 ACP5P13686 325 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 AP1B1Q10567 949 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 TMEM71Q6P5X7 295 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 AGBL5Q8NDL9 886 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 HTR3CQ8WXA8 447 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 SLC38A3Q99624 504 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 ATXN10Q9UBB4 475 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 PCDHGA3Q9Y5H0 932 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 B3GALT1Q9Y5Z6 326 aa24.24■■□□□ 1.47
PTCH1-210ENST00000468211 ASH1LQ9NR48 2969 aaKnown RBP24.23■■□□□ 1.47
PTCH1-210ENST00000468211 ZNF487B1APH4 448 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 J3QKU1 62 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 GPLD1P80108 840 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 NFATC2Q13469 925 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 IYDQ6PHW0 289 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 GPR26Q8NDV2 337 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 CCHCR1Q8TD31 782 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 NKD1Q969G9 470 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 IMP4Q96G21 291 aaKnown RBP24.23■■□□□ 1.47
PTCH1-210ENST00000468211 AGAP3Q96P47 875 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 OLFM3Q96PB7 478 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 ADGRE3Q9BY15 652 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 PDP2Q9P2J9 529 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 SHOC2Q9UQ13 582 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 HYOU1Q9Y4L1 999 aa24.23■■□□□ 1.47
PTCH1-210ENST00000468211 RGSL1A5PLK6 1076 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 STMND1H3BQB6 276 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 APOL1O14791 398 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 SNX2O60749 519 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 TPM3P06753 285 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 ZNF8P17098 575 aaPredicted RBP24.22■■□□□ 1.47
PTCH1-210ENST00000468211 CSTF2P33240 577 aaKnown RBP eCLIP24.22■■□□□ 1.47
PTCH1-210ENST00000468211 HHEXQ03014 270 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 ALS2CLQ60I27 953 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms