RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 LRP8Q14114 963 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 PDK2Q15119 407 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 TBR1Q16650 682 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 ZFYVE27Q5T4F4 411 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 FAM129CQ86XR2 697 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 SFRP1Q8N474 314 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 CCNYQ8ND76 341 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 CCDC112Q8NEF3 446 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 FATE1Q969F0 183 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 WDR24Q96S15 920 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 DPYSL5Q9BPU6 564 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 OCIAD1Q9NX40 245 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 SLC39A1Q9NY26 324 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 PCDHGA3Q9Y5H0 932 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 DNAJC6O75061 913 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 RPL26P61254 145 aaKnown RBP20.89■□□□□ 0.93
COL9A3-207ENST00000467819 NFKB2Q00653 900 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 SLC10A2Q12908 348 aaPredicted RBP20.89■□□□□ 0.93
COL9A3-207ENST00000467819 SNAP47Q5SQN1 464 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 TMEM71Q6P5X7 295 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 XKR5Q6UX68 686 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 MAP7D3Q8IWC1 876 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 IL22RA1Q8N6P7 574 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 PQLC3Q8N755 202 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 OR10G6Q8NH81 332 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 NKD1Q969G9 470 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 FAF2Q96CS3 445 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 IQCDQ96DY2 449 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 VPS18Q9P253 973 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 CNOT6Q9ULM6 557 aaKnown RBP20.89■□□□□ 0.93
COL9A3-207ENST00000467819 NENFQ9UMX5 172 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 RPL26L1Q9UNX3 145 aaKnown RBP20.89■□□□□ 0.93
COL9A3-207ENST00000467819 KCNK6Q9Y257 313 aa20.89■□□□□ 0.93
COL9A3-207ENST00000467819 EFCAB7A8K855 629 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 FADS2P1A8MWK0 482 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 DUX1O43812 170 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 ACP5P13686 325 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 MX2P20592 715 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 CD86P42081 329 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 SPINT3P49223 89 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 HHEXQ03014 270 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 NFATC2Q13469 925 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 QPCTQ16769 361 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-207ENST00000467819 HENMT1Q5T8I9 393 aaKnown RBP20.88■□□□□ 0.93
COL9A3-207ENST00000467819 CCDC13Q8IYE1 715 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 CTNNBL1Q8WYA6 563 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-207ENST00000467819 HDAC11Q96DB2 347 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 LYSMD1Q96S90 227 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 PACSIN1Q9BY11 444 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 TRIM4Q9C037 500 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 DTLQ9NZJ0 730 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 PKD2L2Q9NZM6 624 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 UVRAGQ9P2Y5 699 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 TBC1D29Q9UFV1 150 aa20.88■□□□□ 0.93
COL9A3-207ENST00000467819 A8MU76 341 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 GOLGA6L19H0YKK7 550 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 KCNK1O00180 336 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 SNX2O60749 519 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 JCHAINP01591 159 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 MMP2P08253 660 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 KRT7P08729 469 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 CASP14P31944 242 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 UGT1A3P35503 534 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 FAM182AQ5T1J6 154 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 CCHCR1Q8TD31 782 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 ZNF830Q96NB3 372 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-207ENST00000467819 MLPHQ9BV36 600 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-207ENST00000467819 DDA1Q9BW61 102 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 FAM83DQ9H4H8 585 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 STN1Q9H668 368 aaKnown RBP20.87■□□□□ 0.93
COL9A3-207ENST00000467819 CLMPQ9H6B4 373 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 STARD5Q9NSY2 213 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 IFNKQ9P0W0 207 aa20.87■□□□□ 0.93
COL9A3-207ENST00000467819 ZNF106Q9H2Y7 1883 aaKnown RBP20.87■□□□□ 0.93
COL9A3-207ENST00000467819 H2AFZP0C0S5 128 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 MAPK9P45984 424 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 ZBTB17Q13105 803 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 GALNT3Q14435 633 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 DCAF12Q5T6F0 453 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 ANKS6Q68DC2 871 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 H2AFVQ71UI9 128 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 RAVER1Q8IY67 606 aaKnown RBP20.86■□□□□ 0.93
COL9A3-207ENST00000467819 CACNA2D3Q8IZS8 1091 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 RAPGEF5Q92565 580 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 SLC12A9Q9BXP2 914 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 ASPSCR1Q9BZE9 553 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 ARFGAP3Q9NP61 516 aa20.86■□□□□ 0.93
COL9A3-207ENST00000467819 B4E171 279 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 ANKRD66B4E2M5 251 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 WISP1O95388 367 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 LIFP15018 202 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 ITGB6P18564 788 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 KDELR1P24390 212 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 TSPAN7P41732 249 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 KCNC4Q03721 635 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 CLCA4Q14CN2 919 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 LYSMD3Q7Z3D4 306 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 NCSTNQ92542 709 aa20.85■□□□□ 0.93
COL9A3-207ENST00000467819 RNF157Q96PX1 679 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms