RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, human

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNA1-204	ENST00000466923	WDR83	Q9BRX9	315 aa	Known RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	TUBB2B	Q9BVA1	445 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	PARD6B	Q9BYG5	372 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	SEMA4A	Q9H3S1	761 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	MAGEE1	Q9HCI5	957 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	CASS4	Q9NQ75	786 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	PRMT8	Q9NR22	394 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	IL17C	Q9P0M4	197 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	DKK3	Q9UBP4	350 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	DNAJC16	Q9Y2G8	782 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	CXorf51A	A0A1B0GTR3	108 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923		A0A1B0GVT2	93 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	CCDC162P	A2VCL2	907 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	IQCF5	A8MTL0	148 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	FADS2P1	A8MWK0	482 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	CRTAM	O95727	393 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	MC4R	P32245	332 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	COL9A2	Q14055	689 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	MORF4L2	Q15014	288 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	SF3A2	Q15428	464 aa	Known RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	PLA2G4E	Q3MJ16	856 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	LYSMD4	Q5XG99	296 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	KIAA0895L	Q68EN5	471 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	PSAPL1	Q6NUJ1	521 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	ENPP7	Q6UWV6	458 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	HEATR4	Q86WZ0	1026 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	DENND6A	Q8IWF6	608 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZBTB44	Q8NCP5	570 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	OR13J1	Q8NGT2	312 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	SLCO2A1	Q92959	643 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	NUS1	Q96E22	293 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	TTC25	Q96NG3	672 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	KLF6	Q99612	283 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	BOC	Q9BWV1	1114 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	VPS37B	Q9H9H4	285 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	SGK2	Q9HBY8	427 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	TM7SF3	Q9NS93	570 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	FZD4	Q9ULV1	537 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	SCML1	Q9UN30	329 aa		4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNA1-204	ENST00000466923		A0A1W2PPC4	97 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	SMIM23	A6NLE4	172 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	BCAT2	O15382	392 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CTIF	O43310	598 aa	Known RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	GOT2	P00505	430 aa	Known RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FUCA1	P04066	466 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	WNT1	P04628	370 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	THEGL	P0DJG4	465 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	MYF5	P13349	255 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	OXTR	P30559	389 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	THOP1	P52888	689 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ARL4C	P56559	192 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	UAP1	Q16222	522 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	KHDC1	Q4VXA5	237 aa	Known RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CCDC157	Q569K6	752 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	TRIM61	Q5EBN2	209 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZNF789	Q5FWF6	425 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ICE2	Q659A1	982 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CRTC3	Q6UUV7	619 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	DPPA4	Q7L190	304 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	TMC3	Q7Z5M5	1100 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	GATAD2A	Q86YP4	633 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	HID1	Q8IV36	788 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	SFTPA2	Q8IWL1	248 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CTAGE3P	Q8IX95	158 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	IFT20	Q8IY31	132 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	PPHLN1	Q8NEY8	458 aa	Known RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CCL4L1	Q8NHW4	92 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZNF398	Q8TD17	642 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ART4	Q93070	314 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	RAB7B	Q96AH8	199 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CENPT	Q96BT3	561 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	STAMBPL1	Q96FJ0	436 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FMO2	Q99518	471 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	OR2AG1	Q9H205	316 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	IL21R	Q9HBE5	538 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CYP4F12	Q9HCS2	524 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ZNHIT2	Q9UHR6	403 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FBXO4	Q9UKT5	387 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	RAB23	Q9ULC3	237 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	PLEKHM1	Q9Y4G2	1056 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FRY	Q5TBA9	3013 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	CFAP47	Q6ZTR5	3102 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	GLYATL1P3	A0A0U1RQE8	302 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	UBA6	A0AVT1	1052 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	ERI2	A8K979	691 aa	Known RBP	4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FOXO6	A8MYZ6	492 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	GDF9	O60383	454 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	FAM155B	O75949	473 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	SUN1	O94901	812 aa		4.91	□□□□□ -1.62
KPNA1-204	ENST00000466923	BPNT1	O95861	308 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms