RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 STPG4Q8N801 248 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SLC44A1Q8WWI5 657 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ANKRD9Q96BM1 317 aaPredicted RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ZSCAN31Q96LW9 406 aaPredicted RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 H2AFJQ9BTM1 129 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 MOV10L1Q9BXT6 1211 aaKnown RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 GPR63Q9BZJ6 419 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 RIC8AQ9NPQ8 531 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ACSS1Q9NUB1 689 aaPredicted RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 MPP6Q9NZW5 540 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ACAD8Q9UKU7 415 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ACSL5Q9ULC5 683 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SMCHD1A6NHR9 2005 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 FAM90A26D6RGX4 464 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 NR5A2O00482 541 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 SPINT2O43291 252 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 TNFSF14O43557 240 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 WISP2O76076 250 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 TSHBP01222 138 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 COX7A2P14406 83 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 GGT5P36269 586 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 FGFBP1Q14512 234 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 COL28A1Q2UY09 1125 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 RAB6CQ53S08 254 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 TECRLQ5HYJ1 363 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 Q75L30 129 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 RBM15BQ8NDT2 890 aaKnown RBP2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 KLHL29Q96CT2 875 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 ARHGEF26Q96DR7 871 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 ATOH8Q96SQ7 321 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 RAB6CQ9H0N0 254 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 ABI3Q9P2A4 366 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 TMEM181Q9P2C4 612 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 POLG2Q9UHN1 485 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 CEPT1Q9Y6K0 416 aa2.75□□□□□ -1.97
GTF3C3-209ENST00000466862 LDHAP00338 332 aaKnown RBP2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 LUMP51884 338 aaPredicted RBP2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 PLIN5Q00G26 463 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 GRAMD1BQ3KR37 738 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 KRTCAP3Q53RY4 240 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 NAA35Q5VZE5 725 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 C18orf63Q68DL7 685 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 LCN10Q6JVE6 187 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 TTI2Q6NXR4 508 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 RRM2BQ7LG56 351 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 ZNF248Q8NDW4 579 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 ZCCHC10Q8TBK6 192 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 ACOX2Q99424 681 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 TMEM47Q9BQJ4 181 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 ERVMER34-1Q9H9K5 563 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 SLC6A13Q9NSD5 602 aa2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 MARCH4Q9P2E8 410 aaPredicted RBP2.74□□□□□ -1.97
GTF3C3-209ENST00000466862 UTYO14607 1347 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 OR5K3A6NET4 321 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 USP17L23D6RBM5 183 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 EIF3FO00303 357 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 TNPO2O14787 897 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CIDEAO60543 219 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PDE9AO76083 593 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 SEC31AO94979 1220 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 IGLV1-44P01699 117 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CD48P09326 243 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 HNRNPA1P09651 372 aaKnown RBP eCLIP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CSF2RAP15509 400 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 ZNF23P17027 643 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 UGT1A1P22309 533 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CHRNB4P30926 498 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 HOXC9P31274 260 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 ELF1P32519 619 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 ARCN1P48444 511 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 NR2C2P49116 596 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CLK1P49759 484 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 TERF1P54274 439 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 GALNT2Q10471 571 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PPFIA1Q13136 1202 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 TMEM35AQ53FP2 167 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CXorf66Q5JRM2 361 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PAPD4Q6PIY7 484 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CACNA2D4Q7Z3S7 1137 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PIWIL4Q7Z3Z4 852 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 ADSSL1Q8N142 457 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 WDR20Q8TBZ3 569 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 APBB2Q92870 758 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 IGSF8Q969P0 613 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 STAMBPL1Q96FJ0 436 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 ARPC5LQ9BPX5 153 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 EIF2AK1Q9BQI3 630 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PYGO2Q9BRQ0 406 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 CDK19Q9BWU1 502 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 UPF2Q9HAU5 1272 aaKnown RBP2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 PPP1R14DQ9NXH3 145 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 KLHL9Q9P2J3 617 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 FBXL2Q9UKC9 423 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 SARDHQ9UL12 918 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 KLHL20Q9Y2M5 609 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
GTF3C3-209ENST00000466862 A0A1W2PPI3 338 aa2.72□□□□□ -1.97
GTF3C3-209ENST00000466862 HHLA1C9JL84 531 aa2.72□□□□□ -1.97
GTF3C3-209ENST00000466862 TMEM178BH3BS89 294 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms