RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 DSC2Q02487 901 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 MMRN1Q13201 1228 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 ALG1LQ6GMV1 187 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 IYDQ6PHW0 289 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 TIPARPQ7Z3E1 657 aaKnown RBP18.66■□□□□ 0.58
SRSF4-202ENST00000466448 LRRC49Q8IUZ0 686 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 NIPA2Q8N8Q9 360 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 NCSTNQ92542 709 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 KIAA1143Q96AT1 154 aaPredicted RBP18.66■□□□□ 0.58
SRSF4-202ENST00000466448 BTBD6Q96KE9 485 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 APMAPQ9HDC9 416 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 CNOT6Q9ULM6 557 aaKnown RBP18.66■□□□□ 0.58
SRSF4-202ENST00000466448 KCNK6Q9Y257 313 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 CHKBQ9Y259 395 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 RELNP78509 3460 aa18.66■□□□□ 0.58
SRSF4-202ENST00000466448 A6NCN8 305 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 PRLP01236 227 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 CD48P09326 243 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 GALNT2Q10471 571 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 KRT81Q14533 505 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 CEACAM20Q6UY09 585 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 MAML1Q92585 1016 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 WDR24Q96S15 920 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 ZPBPQ9BS86 351 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 ZNF71Q9NQZ8 489 aaPredicted RBP18.65■□□□□ 0.58
SRSF4-202ENST00000466448 FBXO8Q9NRD0 319 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 RCOR3Q9P2K3 495 aaPredicted RBP18.65■□□□□ 0.58
SRSF4-202ENST00000466448 DNPEPQ9ULA0 475 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 TTLL3Q9Y4R7 772 aa18.65■□□□□ 0.58
SRSF4-202ENST00000466448 MATN3O15232 486 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 STK17BO94768 372 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 ACP5P13686 325 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 MAN1A1P33908 653 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 CASRP41180 1078 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 MAPK9P45984 424 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 ZNF165P49910 485 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 EPHA4P54764 986 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 TYRO3Q06418 890 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 CDC20Q12834 499 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 NCBP2-AS2Q69YL0 99 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 RAVER1Q8IY67 606 aaKnown RBP18.64■□□□□ 0.57
SRSF4-202ENST00000466448 LPCAT1Q8NF37 534 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 C9orf43Q8TAL5 461 aaPredicted RBP18.64■□□□□ 0.57
SRSF4-202ENST00000466448 ARRDC2Q8TBH0 407 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 FAM71BQ8TC56 605 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 SH3KBP1Q96B97 665 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 THAP2Q9H0W7 228 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 STN1Q9H668 368 aaKnown RBP18.64■□□□□ 0.57
SRSF4-202ENST00000466448 RBM22Q9NW64 420 aaKnown RBP eCLIP18.64■□□□□ 0.578e-10■■■■□ 20.9
SRSF4-202ENST00000466448 KLHL3Q9UH77 587 aa18.64■□□□□ 0.57
SRSF4-202ENST00000466448 TMEM184BQ9Y519 407 aaPredicted RBP18.64■□□□□ 0.57
SRSF4-202ENST00000466448 FADS2P1A8MWK0 482 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 SNX2O60749 519 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 F3P13726 295 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 CES1P23141 567 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 OAS2P29728 719 aaKnown RBP18.63■□□□□ 0.57
SRSF4-202ENST00000466448 FOXK1P85037 733 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 NIPAL4Q0D2K0 466 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 ABHD18Q0P651 414 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 PAFAH1B3Q15102 231 aaKnown RBP18.63■□□□□ 0.57
SRSF4-202ENST00000466448 IGFBP7Q16270 282 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 CCDC122Q5T0U0 273 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 HENMT1Q5T8I9 393 aaKnown RBP18.63■□□□□ 0.57
SRSF4-202ENST00000466448 LYSMD3Q7Z3D4 306 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 SLC9B2Q86UD5 537 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 LYSMD1Q96S90 227 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 HERPUD2Q9BSE4 406 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 EFHD1Q9BUP0 239 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 PCDH9Q9HC56 1237 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 IP6K2Q9UHH9 426 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 ANAPC7Q9UJX3 599 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 ANAPC2Q9UJX6 822 aa18.63■□□□□ 0.57
SRSF4-202ENST00000466448 C1orf232A0A0U1RR37 186 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 DLGAP3O95886 979 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 HLA-DQB2P05538 268 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 CA4P22748 312 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 SPINT3P49223 89 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 ARSEP51690 589 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 RPL26P61254 145 aaKnown RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 DPYSL3Q14195 570 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 ANO6Q4KMQ2 910 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 FILIP1LQ4L180 1135 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 ATP1A1-AS1Q5TC04 95 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 HGSNATQ68CP4 663 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 TIGD7Q6NT04 549 aaPredicted RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 KDELC2Q7Z4H8 507 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 LRRN4Q8WUT4 740 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 APOBEC4Q8WW27 367 aaKnown RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 STARD8Q92502 1023 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 FATE1Q969F0 183 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 TBC1D10AQ9BXI6 508 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 NAT10Q9H0A0 1025 aaKnown RBP18.62■□□□□ 0.57
SRSF4-202ENST00000466448 FAM83DQ9H4H8 585 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 RMI1Q9H9A7 625 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 ANKMY1Q9P2S6 941 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 AMACRQ9UHK6 382 aa18.62■□□□□ 0.57
SRSF4-202ENST00000466448 RPL26L1Q9UNX3 145 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms