RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 UGT1A1P22309 533 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A4P22310 534 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 HNRNPA2B1P22626 353 aaKnown RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 CD27P26842 260 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 CNR2P34972 360 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A3P35503 534 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A5P35504 534 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 TRIM23P36406 574 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 HSD17B3P37058 310 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 CDKN1CP49918 316 aaPredicted RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 CACNG1Q06432 222 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SGCGQ13326 291 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SMAD1Q15797 465 aaKnown RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 TYSND1Q2T9J0 566 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 PLK5Q496M5 336 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 MAP9Q49MG5 647 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 GPR33Q49SQ1 333 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 NEPROQ6NW34 567 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 PNCKQ6P2M8 343 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 C3orf62Q6ZUJ4 267 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SNX20Q7Z614 316 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 ABI3BPQ7Z7G0 1075 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 C11orf74Q86VG3 221 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 KCNMB4Q86W47 210 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 TMEFF1Q8IYR6 380 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 OR6P1Q8NGX9 317 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 OR4L1Q8NH43 312 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 FBF1Q8TES7 1133 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 COX14Q96I36 57 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 ZC3H10Q96K80 434 aaKnown RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 BMFQ96LC9 184 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 HSPA12BQ96MM6 686 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 VPS35Q96QK1 796 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SPATA16Q9BXB7 569 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 C1QTNF7Q9BXJ2 289 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 ACSS3Q9H6R3 686 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 VPS37BQ9H9H4 285 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A7Q9HAW7 530 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A10Q9HAW8 530 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A8Q9HAW9 530 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 GPR27Q9NS67 375 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 C20orf96Q9NUD7 363 aaPredicted RBP11.07□□□□□ -0.64
VCP-204ENST00000466100 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 CA5BQ9Y2D0 317 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 PCDHGA2Q9Y5H1 932 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 IGLV3-16A0A075B6K0 115 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 POM121BA6NF01 834 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 CXorf49A8MYA2 514 aaPredicted RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 CD3EAPO15446 510 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 PCCBP05166 539 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 PYGLP06737 847 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 ITGALP20701 1170 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 OGNP20774 298 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 AKT2P31751 481 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 STX2P32856 288 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 PTGER3P43115 390 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 MGAT5Q09328 741 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 ITGA9Q13797 1035 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 KHDC1Q4VXA5 237 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 HSP90AA5PQ58FG0 334 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 RAET1GQ6H3X3 334 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 FBXO38Q6PIJ6 1188 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 KYAT3Q6YP21 454 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 PTAR1Q7Z6K3 402 aaPredicted RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 CILP2Q8IUL8 1156 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 LMNTD2Q8IXW0 634 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 NXPE1Q8N323 547 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 DEFB119Q8N690 84 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 DDHD1Q8NEL9 900 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 ZNF398Q8TD17 642 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 BTN2A2Q8WVV5 523 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 SCG3Q8WXD2 468 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 FOXJ1Q92949 421 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 GLYATL1Q969I3 302 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 FUBP1Q96AE4 644 aaKnown RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 CCDC97Q96F63 343 aaPredicted RBP11.06□□□□□ -0.64
VCP-204ENST00000466100 MYOCQ99972 504 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 FAM167BQ9BTA0 163 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 TEX101Q9BY14 249 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 FAM96AQ9H5X1 160 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 ASB8Q9H765 288 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 CATSPERZQ9NTU4 200 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 HS3ST3A1Q9Y663 406 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 SLC30A1Q9Y6M5 507 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
VCP-204ENST00000466100 A0A1W2PR77 199 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 MEI4A8MW99 385 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 PRAMEF26H0Y7S4 382 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 H0Y8X5 98 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 MAP3K13O43283 966 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 ERLIN1O75477 346 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 PIAS1O75925 651 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms