RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 UCKL1Q9NWZ5 548 aa20.15■□□□□ 0.82
PTCD3-206ENST00000465560 SPASTQ9UBP0 616 aa20.15■□□□□ 0.82
PTCD3-206ENST00000465560 FKBPLQ9UIM3 349 aa20.15■□□□□ 0.82
PTCD3-206ENST00000465560 BTBD3Q9Y2F9 522 aa20.15■□□□□ 0.82
PTCD3-206ENST00000465560 HEATR9A2RTY3 570 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 MROH6A6NGR9 719 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 TNFP01375 233 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 CSRP1P21291 193 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 TERF1P54274 439 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 LAMB3Q13751 1172 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ITGA9Q13797 1035 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 DHX34Q14147 1143 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 PUM1Q14671 1186 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 CHRNA6Q15825 494 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ATP13A5Q4VNC0 1218 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ANKRD22Q5VYY1 191 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 LRRC8BQ6P9F7 803 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 DOK6Q6PKX4 331 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ZNF572Q7Z3I7 529 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 PHYKPLQ8IUZ5 450 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 SLC25A45Q8N413 288 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 SETD7Q8WTS6 366 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 STYXQ8WUJ0 223 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 SCARF2Q96GP6 870 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 DNAJC1Q96KC8 554 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 CYP4F12Q9HCS2 524 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 VPS18Q9P253 973 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ASIC3Q9UHC3 531 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 CDC23Q9UJX2 597 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 APPL1Q9UKG1 709 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 PCOLCE2Q9UKZ9 415 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 OAS3Q9Y6K5 1087 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 CSNK1G3Q9Y6M4 447 aa20.14■□□□□ 0.81
PTCD3-206ENST00000465560 GOLGA4Q13439 2230 aaKnown RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 ARHGEF17Q96PE2 2063 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-206ENST00000465560 AQP9O43315 295 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 URI1O94763 535 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-206ENST00000465560 TMEM63AO94886 807 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 PRAMEF1O95521 474 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 IVLP07476 585 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 ADRA1DP25100 572 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 PSMA3P25788 255 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 ID4P47928 161 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 SARNPP82979 210 aaKnown RBP20.13■□□□□ 0.81
PTCD3-206ENST00000465560 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 PRRT3Q5FWE3 981 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 RD3Q7Z3Z2 195 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 FSTL5Q8N475 847 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-206ENST00000465560 BAHD1Q8TBE0 780 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-206ENST00000465560 LMX1AQ8TE12 382 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 CAMK1GQ96NX5 476 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 KRT12Q99456 494 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 SLC32A1Q9H598 525 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 NLE1Q9NVX2 485 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-206ENST00000465560 SMOXQ9NWM0 555 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 MOSPD1Q9UJG1 213 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 TMPRSS11EQ9UL52 423 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 SUFUQ9UMX1 484 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 TMEM98Q9Y2Y6 226 aa20.13■□□□□ 0.81
PTCD3-206ENST00000465560 NEMP2A6NFY4 417 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 H7C0S8 307 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 SCAMP1O15126 338 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 CBFA2T3O75081 653 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 SRP72O76094 671 aaKnown RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 SLC25A14O95258 325 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 FUCA1P04066 466 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 CTSEP14091 401 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 ADCY8P40145 1251 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 POLD2P49005 469 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 SESN2P58004 480 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 TMPRSS15P98073 1019 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 XIAPP98170 497 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 CKAP4Q07065 602 aaKnown RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 PEX6Q13608 980 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 PPIL6Q8IXY8 311 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 NAT8LQ8N9F0 302 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 MCUQ8NE86 351 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 DEFB124Q8NES8 71 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 RHBDD1Q8TEB9 315 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 PTCD2Q8WV60 388 aaKnown RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 IL22Q9GZX6 179 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 CARS2Q9HA77 564 aaKnown RBP20.12■□□□□ 0.81
PTCD3-206ENST00000465560 BFARQ9NZS9 450 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 RIMKLBQ9ULI2 386 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 TCAF1Q9Y4C2 921 aa20.12■□□□□ 0.81
PTCD3-206ENST00000465560 DCDC2BA2VCK2 349 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 DNALI1O14645 258 aaPredicted RBP20.11■□□□□ 0.81
PTCD3-206ENST00000465560 TTI1O43156 1089 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 GPR39O43194 453 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 ASMTLO95671 621 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 GIMD1P0DJR0 217 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 NPY2RP49146 381 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 C2orf54Q08AI8 447 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 C1orf61Q13536 156 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 ELOCQ15369 112 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 SKIDA1Q1XH10 827 aa20.11■□□□□ 0.81
PTCD3-206ENST00000465560 RNASEH2BQ5TBB1 312 aaKnown RBP20.11■□□□□ 0.81
PTCD3-206ENST00000465560 NLRP9Q7RTR0 991 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms