RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 AAGABQ6PD74 315 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 ACAD11Q709F0 780 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 KDM1BQ8NB78 822 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 EID2BQ96D98 161 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 CCDC28BQ9BUN5 200 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 BBS2Q9BXC9 721 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 SHCBP1LQ9BZQ2 653 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 ZFYVE1Q9HBF4 777 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 SPHK2Q9NRA0 654 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 OAS3Q9Y6K5 1087 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 ATG2AQ2TAZ0 1938 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 MYO7AQ13402 2215 aa21.62■■□□□ 1.05
PDLIM2-216ENST00000464275 NEDD8-MDP1E9PL57 170 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 MAP3K7O43318 606 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 SYN1P17600 705 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 GKP32189 559 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 STK19P49842 368 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ADARP55265 1226 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ATP6V0D1P61421 351 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 AP2B1P63010 937 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ANO7Q6IWH7 933 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 C22orf39Q6P5X5 142 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 PAQR3Q6TCH7 311 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 TAS2R42Q7RTR8 314 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 AFAP1L2Q8N4X5 818 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 NKAPQ8N5F7 415 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 PHF21BQ96EK2 531 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 FAR2Q96K12 515 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 OR52B2Q96RD2 323 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 TUBGCP5Q96RT8 1024 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 TRMOQ9BU70 441 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 CEP44Q9C0F1 390 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ZDHHC7Q9NXF8 308 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 FAM50BQ9Y247 325 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 A0A0U1RQS6 177 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 CAPN8A6NHC0 703 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 SP100P23497 879 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 NTHL1P78549 312 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 MXRA7P84157 204 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 SULT2A1Q06520 285 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 MYLK3Q32MK0 819 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ASTLQ6HA08 431 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 CERS6Q6ZMG9 384 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 FRMD7Q6ZUT3 714 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 SPRED2Q7Z698 418 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ADGRG6Q86SQ4 1221 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 MYLK4Q86YV6 388 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 KIRREL3Q8IZU9 778 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 CMTM5Q96DZ9 223 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 GPR21Q99679 349 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 GTSE1Q9NYZ3 720 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 DPP7Q9UHL4 492 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 CDYLQ9Y232 598 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 FNDC3AQ9Y2H6 1198 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 PLXNB3Q9ULL4 1909 aa21.61■■□□□ 1.05
PDLIM2-216ENST00000464275 ANKRD12Q6UB98 2062 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 TRPC5OSA6NMA1 111 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 E9PBE3 544 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 ZNF197O14709 1029 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 KLHL41O60662 606 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 POU2F2P09086 479 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 PABPC1P11940 636 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 HNF1BP35680 557 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 DMC1Q14565 340 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 CTSL3PQ5NE16 218 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 SH2D4BQ5SQS7 431 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 ZNF678Q5SXM1 525 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 PDE12Q6L8Q7 609 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 PCDH20Q8N6Y1 951 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 KIAA1191Q96A73 305 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 OTUB2Q96DC9 234 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 NUF2Q9BZD4 464 aa21.6■■□□□ 1.05
PDLIM2-216ENST00000464275 C1orf232A0A0U1RR37 186 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 OR1I1O60431 355 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 ESR1P03372 595 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 HNRNPLP14866 589 aaKnown RBP eCLIP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 PPARGP37231 505 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 COPAP53621 1224 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 OR4D1Q15615 310 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 CDKN3Q16667 212 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 ELMSAN1Q6PJG2 1045 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 GRASPQ7Z6J2 395 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 RAB44Q7Z6P3 723 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 STAG3L4Q8TBR4 150 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 FAM136AQ96C01 138 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 ATOH8Q96SQ7 321 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 VCXQ9H320 206 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 GSTO2Q9H4Y5 243 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 WDR55Q9H6Y2 383 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 TRMT6Q9UJA5 497 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 PIKFYVEQ9Y2I7 2098 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 GOLGA8QA0A0J9YX86 632 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 GOLGA8OA6NCC3 632 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 GOLGA8NF8WBI6 632 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 H3BMM5 538 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 NEMP1O14524 444 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 KERAO60938 352 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 ARHGEF15O94989 841 aa21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 HSPA1AP0DMV8 641 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-216ENST00000464275 HSPA1BP0DMV9 641 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms