RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 HSPH1Q92598 858 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 ART4Q93070 314 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 SLC12A9Q9BXP2 914 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 ZMYND15Q9H091 742 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 CDH19Q9H159 772 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 GOLPH3Q9H4A6 298 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 TMEM9Q9P0T7 183 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 CD84Q9UIB8 345 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 PCDHGA3Q9Y5H0 932 aa23.09■■□□□ 1.29
SSNA1-203ENST00000463511 IGHV1OR21-1A0A087WYE8 117 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 PSMD11O00231 422 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 PGLSO95336 258 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 IVLP07476 585 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 THRAP10827 490 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 CTPS1P17812 591 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 NAP1L1P55209 391 aaKnown RBP23.08■■□□□ 1.29
SSNA1-203ENST00000463511 TRA2AQ13595 282 aaKnown RBP eCLIP23.08■■□□□ 1.29
SSNA1-203ENST00000463511 DPYSL2Q16555 572 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 TMCO3Q6UWJ1 677 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 ZNF662Q6ZS27 426 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 RFLNAQ6ZTI6 216 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 ATPAF2Q8N5M1 289 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 AGBL5Q8NDL9 886 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 MCCC1Q96RQ3 725 aaPredicted RBP23.08■■□□□ 1.29
SSNA1-203ENST00000463511 GEMIN8Q9NWZ8 242 aaKnown RBP23.08■■□□□ 1.29
SSNA1-203ENST00000463511 KCNK4Q9NYG8 393 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 B3GALT1Q9Y5Z6 326 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 DOPEY2Q9Y3R5 2298 aa23.08■■□□□ 1.29
SSNA1-203ENST00000463511 MACROD2A1Z1Q3 448 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 MAFKO60675 156 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 SOD1P00441 154 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 LIFP15018 202 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 TEAD1P28347 426 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 CSTF2P33240 577 aaKnown RBP eCLIP23.07■■□□□ 1.28
SSNA1-203ENST00000463511 UGT1A3P35503 534 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 ARL4AP40617 200 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 GPR1P46091 355 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 ARSEP51690 589 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 PEX6Q13608 980 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 USP45Q70EL2 814 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 TRIM74Q86UV6 250 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 ZNF761Q86XN6 746 aaPredicted RBP23.07■■□□□ 1.28
SSNA1-203ENST00000463511 BBS5Q8N3I7 341 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 FAM71BQ8TC56 605 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 SCRN2Q96FV2 425 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 OR2M4Q96R27 311 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 SLC25A18Q9H1K4 315 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 PCDH18Q9HCL0 1135 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.07■■□□□ 1.28
SSNA1-203ENST00000463511 PPP2R2CQ9Y2T4 447 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 TMEM98Q9Y2Y6 226 aa23.07■■□□□ 1.28
SSNA1-203ENST00000463511 ZNF106Q9H2Y7 1883 aaKnown RBP23.07■■□□□ 1.28
SSNA1-203ENST00000463511 GRID2IPA4D2P6 1211 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 KRT7P08729 469 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 GJC1P36383 396 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 MMP13P45452 471 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 DPTQ07507 201 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 ARMC12Q5T9G4 340 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 BORAQ6PGQ7 559 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 MARK2Q7KZI7 788 aaKnown RBP23.06■■□□□ 1.28
SSNA1-203ENST00000463511 POLNQ7Z5Q5 900 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 TECPR1Q7Z6L1 1165 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 DAAM2Q86T65 1068 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 FAM129CQ86XR2 697 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 LRRC57Q8N9N7 239 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 CSPG4P5Q96PW8 444 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 SMIM14Q96QK8 99 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 DDA1Q9BW61 102 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 TSGA10Q9BZW7 698 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 OCIAD1Q9NX40 245 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 SLC39A1Q9NY26 324 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 FLNCQ14315 2725 aa23.06■■□□□ 1.28
SSNA1-203ENST00000463511 KRT86O43790 486 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 SPOPO43791 374 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 PPM1FP49593 454 aaPredicted RBP23.05■■□□□ 1.28
SSNA1-203ENST00000463511 SQSTM1Q13501 440 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 IFI16Q16666 785 aaKnown RBP23.05■■□□□ 1.28
SSNA1-203ENST00000463511 LRRC38Q5VT99 294 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 LRRC66Q68CR7 880 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 ADAMTSL4Q6UY14 1074 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 RNF10Q8N5U6 811 aaKnown RBP23.05■■□□□ 1.28
SSNA1-203ENST00000463511 NSMCE1Q8WV22 266 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 AP2M1Q96CW1 435 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 SCARF2Q96GP6 870 aaPredicted RBP23.05■■□□□ 1.28
SSNA1-203ENST00000463511 ABCG8Q9H221 673 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 GUCA1BQ9UMX6 200 aa23.05■■□□□ 1.28
SSNA1-203ENST00000463511 EFCAB7A8K855 629 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 PDHA1P08559 390 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 CD48P09326 243 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 IL4RP24394 825 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 CDH6P55285 790 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 TLE1Q04724 770 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 RALGPS1Q5JS13 557 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 MARC1Q5VT66 337 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 RHOT1Q8IXI2 618 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 CACNA2D3Q8IZS8 1091 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 SLC37A2Q8TED4 501 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 PIH1D2Q8WWB5 315 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 SCAMP4Q969E2 229 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 DPYSL5Q9BPU6 564 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms