RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 FDFT1P37268 417 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 GRIA1P42261 906 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 GNG11P61952 73 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 FOXK2Q01167 660 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 ELOCQ15369 112 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 ATP13A5Q4VNC0 1218 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 PDPK2PQ6A1A2 396 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 C17orf53Q8N3J3 647 aaPredicted RBP17.55■□□□□ 0.4
VPS52-214ENST00000463486 SDR16C5Q8N3Y7 309 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 GPBAR1Q8TDU6 330 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 DUSP23Q9BVJ7 150 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 SPATA16Q9BXB7 569 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 CARS2Q9HA77 564 aaKnown RBP17.55■□□□□ 0.4
VPS52-214ENST00000463486 TRNAU1APQ9NX07 287 aaKnown RBP17.55■□□□□ 0.4
VPS52-214ENST00000463486 VPS18Q9P253 973 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 PAK5Q9P286 719 aa17.55■□□□□ 0.4
VPS52-214ENST00000463486 FEZ2Q9UHY8 353 aaPredicted RBP17.55■□□□□ 0.4
VPS52-214ENST00000463486 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 PGRMC1O00264 195 aaKnown RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 PPFIA2O75334 1257 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 TPH1P17752 444 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 TNNT3P45378 269 aaPredicted RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 ZNF140P52738 457 aaPredicted RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 XIAPP98170 497 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 TCEA2Q15560 299 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 KHDC1Q4VXA5 237 aaKnown RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 PYCR3Q53H96 274 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 C6orf132Q5T0Z8 1188 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 ZCCHC8Q6NZY4 707 aaKnown RBP17.54■□□□□ 0.4
VPS52-214ENST00000463486 DOK6Q6PKX4 331 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 SFTPA2Q8IWL1 248 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 GLYATL1Q969I3 302 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 VPS35Q96QK1 796 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 C19orf43Q9BQ61 176 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 RAB6BQ9NRW1 208 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 PLEKHM1Q9Y4G2 1056 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 PCDHGA1Q9Y5H4 931 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 ACACBO00763 2458 aa17.54■□□□□ 0.4
VPS52-214ENST00000463486 FAM221BA6H8Z2 402 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 GPR39O43194 453 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A9O60656 530 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 TRIM16O95361 564 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 ALPPL2P10696 532 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 CTSEP14091 401 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A6P19224 532 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 LPOP22079 712 aaPredicted RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A1P22309 533 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A4P22310 534 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A3P35503 534 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A5P35504 534 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 COILP38432 576 aaPredicted RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 ADCY8P40145 1251 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 GNPDA1P46926 289 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 SHC2P98077 582 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 CHRNA6Q15825 494 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 ZNF648Q5T619 568 aaPredicted RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 OGFOD3Q6PK18 319 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 ADGRG6Q86SQ4 1221 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 SLC35F3Q8IY50 421 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 CHCHD4Q8N4Q1 142 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 CCDC89Q8N998 374 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 OR4K2Q8NGD2 314 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 OR52K1Q8NGK4 314 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 OR13C4Q8NGS5 318 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A7Q9HAW7 530 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A10Q9HAW8 530 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 UGT1A8Q9HAW9 530 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 ARFGAP3Q9NP61 516 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 PIH1D1Q9NWS0 290 aaKnown RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 ATXN10Q9UBB4 475 aa17.53■□□□□ 0.4
VPS52-214ENST00000463486 APOBEC2Q9Y235 224 aaKnown RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 TPRP12270 2363 aaKnown RBP17.53■□□□□ 0.4
VPS52-214ENST00000463486 MROH6A6NGR9 719 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 C2orf81A6NN90 581 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 AGAP14A8MT82 685 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 STX7O15400 261 aaKnown RBP17.52■□□□□ 0.4
VPS52-214ENST00000463486 ANXA6P08133 673 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 TCP1P17987 556 aaKnown RBP17.52■□□□□ 0.4
VPS52-214ENST00000463486 SPAM1P38567 509 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 CTBSQ01459 385 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 PEX6Q13608 980 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 ZDHHC20Q5W0Z9 365 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 C17orf82Q86X59 251 aaPredicted RBP17.52■□□□□ 0.4
VPS52-214ENST00000463486 MAGOHBQ96A72 148 aaKnown RBP17.52■□□□□ 0.4
VPS52-214ENST00000463486 TRIM39Q9HCM9 518 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 CASS4Q9NQ75 786 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 SPATS2LQ9NUQ6 558 aaKnown RBP17.52■□□□□ 0.4
VPS52-214ENST00000463486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.52■□□□□ 0.4
VPS52-214ENST00000463486 MOSPD1Q9UJG1 213 aa17.52■□□□□ 0.4
VPS52-214ENST00000463486 ARHGEF17Q96PE2 2063 aaPredicted RBP17.52■□□□□ 0.39
VPS52-214ENST00000463486 WDFY3Q8IZQ1 3526 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 MYLKQ15746 1914 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 KNTC1P50748 2209 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
VPS52-214ENST00000463486 EME2A4GXA9 379 aaPredicted RBP17.51■□□□□ 0.39
VPS52-214ENST00000463486 CHUKO15111 745 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms