RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 NUS1Q96E22 293 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 TCF12Q99081 682 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 ROPN1BQ9BZX4 212 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 PCED1AQ9H1Q7 454 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 FAM96AQ9H5X1 160 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 C6orf106Q9H6K1 298 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 EBF2Q9HAK2 575 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 ROPN1Q9HAT0 212 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-202ENST00000463060 C11orf16Q9NQ32 467 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 RAPGEFL1Q9UHV5 662 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 SLC24A2Q9UI40 661 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 SLC30A1Q9Y6M5 507 aa14.26□□□□□ -0.13
COL6A1-202ENST00000463060 IGLV3-16A0A075B6K0 115 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 FAM47DPA6NHR8 397 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 FADS2P1A8MWK0 482 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 K7ESM1 405 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 RAD51BO15315 384 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 LAMTOR5O43504 91 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 AVPR2P30518 371 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 TRIM23P36406 574 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 SGCGQ13326 291 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 SMAD1Q15797 465 aaKnown RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 FASTKD1Q53R41 847 aaKnown RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ZRANB3Q5FWF4 1079 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF789Q5FWF6 425 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 KIAA0895LQ68EN5 471 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF470Q6ECI4 717 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 MRNIPQ6NTE8 343 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PNCKQ6P2M8 343 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PACS1Q6VY07 963 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 CERS6Q6ZMG9 384 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 LDB1Q86U70 411 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 NXPE1Q8N323 547 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PPM1NQ8N819 430 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PLA2G15Q8NCC3 412 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 CADM4Q8NFZ8 388 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 KLK6Q92876 244 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 VPS35Q96QK1 796 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 CCDC77Q9BR77 488 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ORAI3Q9BRQ5 295 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ZSCAN5AQ9BUG6 496 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 GPR174Q9BXC1 333 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ASB8Q9H765 288 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PPCSQ9HAB8 311 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 MBNL1Q9NR56 388 aaKnown RBP14.25□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF180Q9UJW8 692 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 FBXO4Q9UKT5 387 aa14.25□□□□□ -0.13
COL6A1-202ENST00000463060 EXOC1LA0A1B0GW35 172 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 HMX2A2RU54 273 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 PRR23AA6NEV1 266 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 ATP8B1O43520 1251 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 GPR37L1O60883 481 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 FAM155BO75949 473 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 HAUS5O94927 633 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 ITGALP20701 1170 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 FNTBP49356 437 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 LRRC14Q15048 493 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 DBN1Q16643 649 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 USP39Q53GS9 565 aaKnown RBP14.24□□□□□ -0.13
COL6A1-202ENST00000463060 SDCCAG8Q86SQ7 713 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-202ENST00000463060 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
COL6A1-202ENST00000463060 SERPINA9Q86WD7 417 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 CTAGE3PQ8IX95 158 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 BTN2A2Q8WVV5 523 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 CDKL2Q92772 493 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 BIRC7Q96CA5 298 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 PAFAH2Q99487 392 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 CPNE1Q99829 537 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 SPATA16Q9BXB7 569 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
COL6A1-202ENST00000463060 FNDC3AQ9Y2H6 1198 aaKnown RBP14.24□□□□□ -0.13
COL6A1-202ENST00000463060 POC1B-GALNT4F8VUJ3 575 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 F7P08709 466 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ACRV1P26436 265 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 MAT2AP31153 395 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 GP5P40197 560 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 MSH2P43246 934 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 TTPAP49638 278 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 CSE1LP55060 971 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ADARP55265 1226 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 MPP1Q00013 466 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 B4GALNT1Q00973 533 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 IRF4Q15306 451 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 TNFAIP8L3Q5GJ75 292 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 GPRC6AQ5T6X5 926 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 GRTP1Q5TC63 336 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 LYPLAL1Q5VWZ2 237 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF549Q6P9A3 640 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ADAMTSL4Q6UY14 1074 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 STRA8Q7Z7C7 330 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 DENND6BQ8NEG7 585 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 DDHD1Q8NEL9 900 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms