RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 HLA-BQ31612 363 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 BBS9Q3SYG4 887 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-203ENST00000462324 ATP13A5Q4VNC0 1218 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 LDLRAP1Q5SW96 308 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 LYPLAL1Q5VWZ2 237 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 LAYNQ6UX15 382 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 FAM151BQ6UXP7 276 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 PRR23CQ6ZRP0 262 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 CEP128Q6ZU80 1094 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 CENPUQ71F23 418 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 SNX20Q7Z614 316 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 SPATS2Q86XZ4 545 aaKnown RBP13.04□□□□□ -0.32
PHGDH-203ENST00000462324 PHYKPLQ8IUZ5 450 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 OR56A4Q8NGH8 313 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 GDAP1Q8TB36 358 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 HDAC10Q969S8 669 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■■ 68.5
PHGDH-203ENST00000462324 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 COX14Q96I36 57 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TBATAQ96M53 351 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TTC25Q96NG3 672 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 ELF4Q99607 663 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-203ENST00000462324 GTPBP2Q9BX10 602 aaKnown RBP13.04□□□□□ -0.32
PHGDH-203ENST00000462324 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 TRIM39Q9HCM9 518 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 GRHL1Q9NZI5 618 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 VPS18Q9P253 973 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 CNOT6Q9ULM6 557 aaKnown RBP13.04□□□□□ -0.32
PHGDH-203ENST00000462324 NUMA1Q14980 2115 aa13.04□□□□□ -0.32
PHGDH-203ENST00000462324 LNP1A1A4G5 178 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 INPP4BO15327 924 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TP73O15350 636 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 VEGFDO43915 354 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A9O60656 530 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 RASGRP1O95267 797 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 ASMTLO95671 621 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TNFP01375 233 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 CSF2P04141 144 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 ZNF883P0CG24 379 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PGAM1P18669 254 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A6P19224 532 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A1P22309 533 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A4P22310 534 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A3P35503 534 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A5P35504 534 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PLTPP55058 493 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
PHGDH-203ENST00000462324 HNRNPKP61978 463 aaKnown RBP eCLIP13.03□□□□□ -0.323e-7■□□□□ 8.5
PHGDH-203ENST00000462324 NFATC2Q13469 925 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PEX6Q13608 980 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
PHGDH-203ENST00000462324 ZRANB3Q5FWF4 1079 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TCEAL6Q6IPX3 200 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 AFTPHQ6ULP2 937 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 CERS6Q6ZMG9 384 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TAS2R42Q7RTR8 314 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 IFT20Q8IY31 132 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 SLC22A18ASQ8N1D0 253 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PELI3Q8N2H9 469 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 OR13J1Q8NGT2 312 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 OR4L1Q8NH43 312 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TCEAL3Q969E4 200 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 ZNF778Q96MU6 729 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 EBNA1BP2Q99848 306 aaKnown RBP13.03□□□□□ -0.32
PHGDH-203ENST00000462324 SLC13A1Q9BZW2 595 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 ZCCHC2Q9C0B9 1178 aaKnown RBP13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A7Q9HAW7 530 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A10Q9HAW8 530 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 UGT1A8Q9HAW9 530 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 TREX1Q9NSU2 369 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 KLQ9UEF7 1012 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 CRLS1Q9UJA2 301 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 SLC17A4Q9Y2C5 497 aa13.03□□□□□ -0.32
PHGDH-203ENST00000462324 A0A1B0GTQ1 180 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 CCDC78A2IDD5 438 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 CFAP99D6REC4 459 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 GAPDHSO14556 408 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-203ENST00000462324 PFDN6O15212 129 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 USP1O94782 785 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.33
PHGDH-203ENST00000462324 CEACAM5P06731 702 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 IVLP07476 585 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 RALBP11234 206 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
PHGDH-203ENST00000462324 NMBRP28336 390 aa13.02□□□□□ -0.33
PHGDH-203ENST00000462324 CCT8P50990 548 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms