RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SLC30A1Q9Y6M5 507 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 HIDE1A8MVS5 230 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 SUPT3HB4E1H0 165 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 TBX10O75333 385 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 SUPT3HO75486 399 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 ECI2O75521 394 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 CYBBP04839 570 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 GFAPP14136 432 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 GKP32189 559 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 GTF2A1P52655 376 aaPredicted RBP20.1■□□□□ 0.81
CCM2-203ENST00000461377 TSNQ15631 228 aaKnown RBP20.1■□□□□ 0.81
CCM2-203ENST00000461377 CCDC6Q16204 474 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 CLEC6AQ6EIG7 209 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 SIDT2Q8NBJ9 832 aaKnown RBP20.1■□□□□ 0.81
CCM2-203ENST00000461377 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 LZTS1Q9Y250 596 aa20.1■□□□□ 0.81
CCM2-203ENST00000461377 LRRC14BA6NHZ5 514 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 SYCE1LA8MT33 242 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CDC7O00311 574 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 GPR39O43194 453 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CDK14O94921 469 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 BMP1P13497 986 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 EPHA5P54756 1037 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CDH13P55290 713 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 SH3BP2P78314 561 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 ZRSR2Q15696 482 aaKnown RBP20.09■□□□□ 0.81
CCM2-203ENST00000461377 CDKN3Q16667 212 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 UGT3A2Q3SY77 523 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 PITRM1Q5JRX3 1037 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 DGKKQ5KSL6 1271 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CERS6Q6ZMG9 384 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CYHR1Q6ZMK1 362 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CMTM8Q8IZV2 173 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CLYBLQ8N0X4 340 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 FBXO39Q8N4B4 442 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 GRIN3AQ8TCU5 1115 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
CCM2-203ENST00000461377 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.09■□□□□ 0.812e-6■■■■■ 54.9
CCM2-203ENST00000461377 FUBP1Q96AE4 644 aaKnown RBP20.09■□□□□ 0.81
CCM2-203ENST00000461377 TNKS2Q9H2K2 1166 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 ATP13A3Q9H7F0 1226 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 ZFYVE1Q9HBF4 777 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 MRGBPQ9NV56 204 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 CXXC1Q9P0U4 656 aaPredicted RBP20.09■□□□□ 0.81
CCM2-203ENST00000461377 CCL26Q9Y258 94 aa20.09■□□□□ 0.81
CCM2-203ENST00000461377 NPEPPSL1A6NEC2 478 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 GAPDHSO14556 408 aaPredicted RBP20.08■□□□□ 0.81
CCM2-203ENST00000461377 AIM2O14862 343 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 KLK8O60259 260 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 PDE5AO76074 875 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 FGF4P08620 206 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 NUDT2P50583 147 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 PPIGQ13427 754 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCM2-203ENST00000461377 PLPP4Q5VZY2 271 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 C16orf89Q6UX73 402 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 FBXW8Q8N3Y1 598 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 MRPL43Q8N983 215 aaKnown RBP20.08■□□□□ 0.81
CCM2-203ENST00000461377 KYQ8NBH2 561 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 OR2AP1Q8NGE2 309 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 DTX3LQ8TDB6 740 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 GBF1Q92538 1859 aa20.08■□□□□ 0.81
CCM2-203ENST00000461377 BTN3A1O00481 513 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 CLASP2O75122 1294 aaKnown RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 HSPA1AP0DMV8 641 aaKnown RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 HSPA1BP0DMV9 641 aaKnown RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 SRCP12931 536 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 CTSOP43234 321 aaPredicted RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 MTTPP55157 894 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 SQLEQ14534 574 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 RIN3Q8TB24 985 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 VOPP1Q96AW1 172 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 RCN3Q96D15 328 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 TCEAL4Q96EI5 215 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 NSUN5Q96P11 429 aaKnown RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 LBHD1Q9BQE6 289 aaPredicted RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 PRPF19Q9UMS4 504 aaKnown RBP20.08■□□□□ 0.8
CCM2-203ENST00000461377 LRRC42Q9Y546 428 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 PCDHB1Q9Y5F3 818 aa20.08■□□□□ 0.8
CCM2-203ENST00000461377 C1orf232A0A0U1RR37 186 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 CAPN8A6NHC0 703 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 STX16-NPEPL1H3BU86 382 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 STX16O14662 325 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 PRMT5O14744 637 aaPredicted RBP20.07■□□□□ 0.8
CCM2-203ENST00000461377 MOSPD3O75425 235 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 FGF19O95750 216 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 RPS17P08708 135 aaKnown RBP20.07■□□□□ 0.8
CCM2-203ENST00000461377 ARSAP15289 507 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 CHRM3P20309 590 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 DDX6P26196 483 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCM2-203ENST00000461377 EEF1DP29692 281 aaKnown RBP20.07■□□□□ 0.8
CCM2-203ENST00000461377 HLA-FP30511 346 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 HNF1BP35680 557 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 SESN3P58005 492 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 IL2P60568 153 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 PPP1R3AQ16821 1122 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 FAM219BQ5XKK7 198 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 DSELQ8IZU8 1212 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 EEF1AKMT1Q8WVE0 214 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 LINGO1Q96FE5 620 aa20.07■□□□□ 0.8
CCM2-203ENST00000461377 ZNF570Q96NI8 536 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms