RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SORBS1Q9BX66 1292 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TSGA10Q9BZW7 698 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIM4Q9C037 500 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 NACA2Q9H009 215 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 DPEP3Q9H4B8 488 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 GSTO2Q9H4Y5 243 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ASB7Q9H672 318 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TLE6Q9H808 572 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KIF9Q9HAQ2 790 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PLEKHA5Q9HAU0 1116 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 GPR35Q9HC97 309 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ACP6Q9NPH0 428 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ITM2CQ9NQX7 267 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC38A7Q9NVC3 462 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ANO10Q9NW15 660 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 RRN3Q9NYV6 651 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF212Q9UDV6 495 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ARMCX3Q9UH62 379 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PACSIN3Q9UKS6 424 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 C2CD2Q9Y426 696 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CACNA1HO95180 2353 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 GVINP1Q7Z2Y8 2422 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 A0A087WWL8 130 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 WDR27A2RRH5 827 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM234BA2RU67 622 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MYBPHLA2RUH7 354 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 EME2A4GXA9 379 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SRRM3A6NNA2 597 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF785A8K8V0 405 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 KPNA7A9QM74 516 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PRRT4C9JH25 899 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CLDN5O00501 218 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 EPHB6O15197 1021 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC16A3O15427 465 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 HOXA3O43365 443 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TBX10O75333 385 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RASSF9O75901 435 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 STC2O76061 302 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NDST3O95803 873 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 AGR2O95994 175 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 LMNAP02545 664 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RB1P06400 928 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 GRPP07492 148 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC166P0CW27 439 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CTSAP10619 480 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CYP3A5P20815 502 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 BMP5P22003 454 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SP100P23497 879 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RPL9P32969 192 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SERPINF1P36955 418 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 FMO5P49326 533 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 GLUD2P49448 558 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 AARSP49588 968 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TAF6P49848 677 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MXI1P50539 228 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 COPB1P53618 953 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CACNA2D1P54289 1103 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 UCP3P55916 312 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 ARL4CP56559 192 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RAP2BP61225 183 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SNRPFP62306 86 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NTHL1P78549 312 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PHEXP78562 749 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RBP5P82980 135 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 ZBED6P86452 979 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MYL7Q01449 175 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 KRT17Q04695 432 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 GOLGA8FQ08AF8 430 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 GOLGA8DPQ0D2H9 430 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 FOXO1Q12778 655 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TRPC3Q13507 836 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PTK2BQ14289 1009 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 UBXN2BQ14CS0 331 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PSMD5Q16401 504 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NFIL3Q16649 462 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF699Q32M78 642 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CEP85LQ5SZL2 805 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 ANKS6Q68DC2 871 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CAPRIN2Q6IMN6 1127 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CYP26C1Q6V0L0 522 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 INTS8Q75QN2 995 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 B4GALNT4Q76KP1 1039 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 APTXQ7Z2E3 356 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 LCA5Q86VQ0 697 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NAV2Q8IVL1 2488 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CD302Q8IX05 232 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL43Q8N983 215 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 GLIS1Q8NBF1 620 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIM58Q8NG06 486 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 LMO3Q8TAP4 145 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TEKT4Q8WW24 435 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 VOPP1Q96AW1 172 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NACC2Q96BF6 587 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL38Q96DV4 380 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 C16orf45Q96MC5 204 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms