RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 H7C0S8 307 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 RAD51CO43502 376 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 TMEM63AO94886 807 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 PSMA3P25788 255 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 BLKP51451 505 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 SESN2P58004 480 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-209ENST00000460573 SHC2P98077 582 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 MORF4L2Q15014 288 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 OR13C4Q8NGS5 318 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 COX14Q96I36 57 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 VPS35Q96QK1 796 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 ERP44Q9BS26 406 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 RAB17Q9H0T7 212 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 UTP11Q9Y3A2 253 aaKnown RBP22.31■■□□□ 1.16
C9orf3-209ENST00000460573 TCAF1Q9Y4C2 921 aa22.31■■□□□ 1.16
C9orf3-209ENST00000460573 A0A1B0GTQ1 180 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 CSF2P04141 144 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 CCT8P50990 548 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 SLC14A1Q13336 389 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 TPRG1LQ5T0D9 272 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 ENPP7Q6UWV6 458 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 KDM7AQ6ZMT4 941 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 CAND1Q86VP6 1230 aaKnown RBP22.3■■□□□ 1.16
C9orf3-209ENST00000460573 MMGT1Q8N4V1 131 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 OR56A4Q8NGH8 313 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 BTN2A2Q8WVV5 523 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 SERPINB12Q96P63 405 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 LGR4Q9BXB1 951 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 KLQ9UEF7 1012 aa22.3■■□□□ 1.16
C9orf3-209ENST00000460573 SCN8AQ9UQD0 1980 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 SPAARA0A1B0GVQ0 90 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 MAGEB16A2A368 324 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 FADS2P1A8MWK0 482 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 H3BM21 787 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 SEC31AO94979 1220 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 HNRNPKP61978 463 aaKnown RBP eCLIP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 PPARDQ03181 441 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 EIF2B5Q13144 721 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 PTPRCAPQ14761 206 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 SUZ12Q15022 739 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 CCDC38Q502W7 563 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 TSTD2Q5T7W7 516 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 HIBCHQ6NVY1 386 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 C8orf74Q6P047 294 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 FAM151BQ6UXP7 276 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 GLYATL1Q969I3 302 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 DNAJC1Q96KC8 554 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 MRM3Q9HC36 420 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 DNAJC28Q9NX36 388 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 FKBPLQ9UIM3 349 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 CNOT6Q9ULM6 557 aaKnown RBP22.29■■□□□ 1.16
C9orf3-209ENST00000460573 PCDHGB2Q9Y5G2 931 aa22.29■■□□□ 1.16
C9orf3-209ENST00000460573 SDR42E2A6NKP2 422 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 GOLGA8MH3BSY2 632 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SRP72O76094 671 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SLC25A14O95258 325 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 NME1P15531 152 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 MGAT1P26572 445 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 MAGEA3P43357 314 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SRP54P61011 504 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 XIAPP98170 497 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 ACVR1Q04771 509 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 CHRNA6Q15825 494 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 ATP13A5Q4VNC0 1218 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 DNTTIP2Q5QJE6 756 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 PHYKPLQ8IUZ5 450 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 ZNF398Q8TD17 642 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SETD7Q8WTS6 366 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 CDKN2AIPNLQ96HQ2 116 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 TBATAQ96M53 351 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 KIFC1Q9BW19 673 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 TRIM31Q9BZY9 425 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 IL21RQ9HBE5 538 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 TM7SF3Q9NS93 570 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 WHRNQ9P202 907 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 VPS18Q9P253 973 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 ANAPC5Q9UJX4 755 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SLC17A4Q9Y2C5 497 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 FNDC3AQ9Y2H6 1198 aaKnown RBP22.28■■□□□ 1.16
C9orf3-209ENST00000460573 SLC30A1Q9Y6M5 507 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 DGKBQ9Y6T7 804 aa22.28■■□□□ 1.16
C9orf3-209ENST00000460573 TMEM202A6NGA9 273 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 ACACBO00763 2458 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 GAPDHSO14556 408 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-209ENST00000460573 INPP4BO15327 924 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 PCDHGA12O60330 932 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 RASGRP1O95267 797 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 PRAMEF1O95521 474 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 RPL21P46778 160 aaKnown RBP22.27■■□□□ 1.16
C9orf3-209ENST00000460573 ITGA8P53708 1063 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 TMPRSS15P98073 1019 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 CALCOCO2Q13137 446 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 GLE1Q53GS7 698 aaKnown RBP22.27■■□□□ 1.16
C9orf3-209ENST00000460573 PRAMEF14Q5SWL7 426 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 DUPD1Q68J44 220 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 NAXDQ8IW45 347 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 SLC13A1Q9BZW2 595 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 CHRAC1Q9NRG0 131 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 SMOXQ9NWM0 555 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 SYBUQ9NX95 663 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms