RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 VTI1BQ9UEU0 232 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SLC38A8A6NNN8 435 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SLCO1B7G3V0H7 640 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 PSMD12O00232 456 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SNAP91O60641 907 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 KATNA1O75449 491 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 OAZ2O95190 189 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 LINC00032P0C843 101 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 FGFR3P22607 806 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 EGFLAMQ63HQ2 1017 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 DCDC5Q6ZRR9 648 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 ANKS3Q6ZW76 656 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 LRRC49Q8IUZ0 686 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 BORCS5Q969J3 196 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 ARPC5LQ9BPX5 153 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SLC39A3Q9BRY0 314 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 STN1Q9H668 368 aaKnown RBP15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SIP14410 1827 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 GON4LQ3T8J9 2241 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 A0A1B0GTW7 788 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 A8MT66 165 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 TRIM16O95361 564 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 FUCA1P04066 466 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 PFKPQ01813 784 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 FAM91A1Q658Y4 838 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 IMP4Q96G21 291 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 SYN3O14994 580 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 ACSL4O60488 711 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 CNOT3O75175 753 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 C1RP00736 705 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF12P17014 697 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 HTRA3P83110 453 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF598Q86UK7 904 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 EME1Q96AY2 570 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 PLEKHA8Q96JA3 519 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 C8orf48Q96LL4 319 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 NOL6Q9H6R4 1146 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 AGO1Q9UL18 857 aaKnown RBP15.35■□□□□ 0.05
LMNB1-203ENST00000460265 PSMD13Q9UNM6 376 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 ATP11BQ9Y2G3 1177 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 PTGDR2Q9Y5Y4 395 aa15.35■□□□□ 0.05
LMNB1-203ENST00000460265 CCNT2O60583 730 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ME2P23368 584 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CDKN2DP55273 166 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 OGFRL1Q5TC84 451 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 PTRHD1Q6GMV3 140 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 MSANTD2Q6P1R3 559 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CILP2Q8IUL8 1156 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 FBXO39Q8N4B4 442 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 C2CD4AQ8NCU7 369 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CCDC126Q96EE4 140 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 MYEOVQ96EZ4 313 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 NEURL2Q9BR09 285 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 LATS2Q9NRM7 1088 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 HACD3Q9P035 362 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TRMT6Q9UJA5 497 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 SNX13Q9Y5W8 968 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 A0A0G2JMZ2 1700 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 PABPN1LA6NDY0 278 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ANGPT2O15123 496 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 BAIAP3O94812 1187 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ARNTP27540 789 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 THOP1P52888 689 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ECT2LQ008S8 904 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ELAVL2Q12926 359 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 STX5Q13190 355 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 IRF5Q13568 498 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 XKR5Q6UX68 686 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 RDH11Q8TC12 318 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 PCDHAC1Q9H158 963 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 COPG1Q9Y678 874 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF638Q14966 1978 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 PPP6CO00743 305 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TBL1XO60907 577 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 XRCC1P18887 633 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CPOXP36551 454 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ARCN1P48444 511 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TUFMP49411 452 aaKnown RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 RAD51Q06609 339 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TSTA3Q13630 321 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 NRF1Q16656 503 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ATXN7L2Q5T6C5 722 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 PAQR3Q6TCH7 311 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 UMODL1-AS1Q8N2C9 162 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CATSPER1Q8NEC5 780 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ASIC4Q96FT7 647 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 BIRC8Q96P09 236 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMNB1-203ENST00000460265 TPK1Q9H3S4 243 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 ZNHIT2Q9UHR6 403 aa15.34■□□□□ 0.05
LMNB1-203ENST00000460265 CHEK2O96017 543 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 GALTP07902 379 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 RAB15P59190 212 aa15.33■□□□□ 0.05
LMNB1-203ENST00000460265 IL10RBQ08334 325 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms