RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 DDHD1Q8NEL9 900 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 LMX1AQ8TE12 382 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 DCUN1D1Q96GG9 259 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 AP1M1Q9BXS5 423 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 KMOO15229 486 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 KCNK5O95279 499 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 SEPT6Q14141 434 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 NR0B2Q15466 257 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 DENND5AQ6IQ26 1287 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 LMNTD2Q8IXW0 634 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 ZNF398Q8TD17 642 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 MS4A14Q96JA4 679 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 CNDP2Q96KP4 475 aaKnown RBP10.62□□□□□ -0.71
UBR4-208ENST00000459947 TSSK1BQ9BXA7 367 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 ASIC3Q9UHC3 531 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 CRLS1Q9UJA2 301 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 FAM186AA6NE01 2351 aa10.62□□□□□ -0.71
UBR4-208ENST00000459947 GDF9O60383 454 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SLC25A14O95258 325 aaPredicted RBP10.61□□□□□ -0.71
UBR4-208ENST00000459947 CHRNA4P43681 627 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 DAB2P98082 770 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 CACNG1Q06432 222 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SHBQ15464 509 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 ZNF572Q7Z3I7 529 aaPredicted RBP10.61□□□□□ -0.71
UBR4-208ENST00000459947 PLA2G15Q8NCC3 412 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 FAM129AQ9BZQ8 928 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SAMD15Q9P1V8 674 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 MOSPD1Q9UJG1 213 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 CDC23Q9UJX2 597 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 TCAF1Q9Y4C2 921 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 ZNF106Q9H2Y7 1883 aaKnown RBP10.61□□□□□ -0.71
UBR4-208ENST00000459947 AP2A2O94973 939 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 GP1BAP07359 652 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 DR1Q01658 176 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SEMG2Q02383 582 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SYT10Q6XYQ8 523 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 GPR26Q8NDV2 337 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 RAB17Q9H0T7 212 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 CARS2Q9HA77 564 aaKnown RBP10.61□□□□□ -0.71
UBR4-208ENST00000459947 GPR34Q9UPC5 381 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SLCO1B1Q9Y6L6 691 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SLC4A1P02730 911 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 CKMT2P17540 419 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 MSH3P20585 1137 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 KCNJ1P48048 391 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 KCNJ11Q14654 390 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 TRIP6Q15654 476 aaKnown RBP10.61□□□□□ -0.71
UBR4-208ENST00000459947 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 ALS2CLQ60I27 953 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 LAYNQ6UX15 382 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 LRRTM4Q86VH4 590 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 OR4K2Q8NGD2 314 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 KIF18AQ8NI77 898 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 GPBAR1Q8TDU6 330 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 OR1E3Q8WZA6 343 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 SH3KBP1Q96B97 665 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 GRAMD1AQ96CP6 724 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 IL21RQ9HBE5 538 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 OR1A2Q9Y585 309 aa10.61□□□□□ -0.71
UBR4-208ENST00000459947 F5H423 210 aaPredicted RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 CEACAM5P06731 702 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ADCY8P40145 1251 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 CAV1Q03135 178 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 TSTD2Q5T7W7 516 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 DEFB124Q8NES8 71 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 GDAP1Q8TB36 358 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 CAPZA3Q96KX2 299 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 LRRC61Q9BV99 259 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 FOXP3Q9BZS1 431 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 CD84Q9UIB8 345 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ANAPC5Q9UJX4 755 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 SCN8AQ9UQD0 1980 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ADAMTS9Q9P2N4 1935 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 TMX2-CTNND1H3BSU7 103 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 DNALI1O14645 258 aaPredicted RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 SH3BP5O60239 455 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 PIRTP0C851 137 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ACVR1Q04771 509 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 MORF4L2Q15014 288 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 PRRT3Q5FWE3 981 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 TAF8Q7Z7C8 310 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 OR52K1Q8NGK4 314 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 LRRC39Q96DD0 335 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 DPYSL5Q9BPU6 564 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 APOL2Q9BQE5 337 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 CYP4F12Q9HCS2 524 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 FGF22Q9HCT0 170 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 MROH6A6NGR9 719 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 NUAK1O60285 661 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 CBFA2T3O75081 653 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 SRP72O76094 671 aaKnown RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 PRAMEF1O95521 474 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 SOD1P00441 154 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 PNLIPP16233 465 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms