RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 A0A1W2PNU3 283 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 GOLGA6CA6NDK9 693 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 GOLGA6BA6NDN3 693 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 KCNJ13O60928 360 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 DNAJC6O75061 913 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PPFIA2O75334 1257 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 TNFSF15O95150 251 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 IPO7O95373 1038 aaKnown RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 GOLGA6DP0CG33 693 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 ITPKBP27987 946 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PTPN7P35236 360 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 UGT1A5P35504 534 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 NOP2P46087 812 aaKnown RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 EPHA4P54764 986 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 CCDC173Q0VFZ6 552 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 MFSD7Q6UXD7 560 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 SPOCD1Q6ZMY3 1216 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 TMC3Q7Z5M5 1100 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 NAGSQ8N159 534 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 TRAM1L1Q8N609 369 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 CCL4L1Q8NHW4 92 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 P3H4Q92791 437 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 FCRL3Q96P31 734 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PPP1R2P1Q96PQ5 205 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 VPS35Q96QK1 796 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 WDR24Q96S15 920 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 STN1Q9H668 368 aaKnown RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 UCK1Q9HA47 277 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 TRIM39Q9HCM9 518 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 SARS2Q9NP81 518 aaKnown RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 GOLGA6AQ9NYA3 693 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PDP2Q9P2J9 529 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 TRHDEQ9UKU6 1024 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 CNOT6Q9ULM6 557 aaKnown RBP9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PCDHA13Q9Y5I0 950 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 ATMQ13315 3056 aa9.93□□□□□ -0.82
HDLBP-228ENST00000459788 PIKFYVEQ9Y2I7 2098 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 hCG_1818297A0A087WSY0 165 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 KIR2DS5A0A0G2JLQ3 304 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 A0A0G2JNG1 304 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 LOC285095A0A1B0GVY8 99 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 APOC4-APOC2K7ER74 178 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 KIR2DS3K7RE56 304 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ERVH48-1M5A8F1 160 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 CHUKO15111 745 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 B4GAT1O43505 415 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 VEGFDO43915 354 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 NUAK1O60285 661 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 CST8O60676 142 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ECEL1O95672 775 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 APOC2P02655 101 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 JMJD7P0C870 316 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 PTPN3P26045 913 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 HMGCLP35914 325 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ACTR1BP42025 376 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ACTR1AP61163 376 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 MPP3Q13368 585 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 BIRC2Q13490 618 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 KIR2DS5Q14953 304 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ZNF569Q5MCW4 686 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 TMEM164Q5U3C3 297 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 SLC30A9Q6PML9 568 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 BBS12Q6ZW61 710 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 LYSMD3Q7Z3D4 306 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 CCDC112Q8NEF3 446 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 OR4D9Q8NGE8 314 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 RNF25Q96BH1 459 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 AGAP3Q96P47 875 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 FCRL5Q96RD9 977 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 EPB41L5Q9HCM4 733 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 CD84Q9UIB8 345 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ATXN7L1Q9ULK2 861 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 PCDHGA3Q9Y5H0 932 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 ST14Q9Y5Y6 855 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 EPN1Q9Y6I3 576 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-228ENST00000459788 SDK2Q58EX2 2172 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 PIEZO2Q9H5I5 2752 aa9.92□□□□□ -0.82
HDLBP-228ENST00000459788 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 CCDC66A2RUB6 948 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 KLHL33A6NCF5 533 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 EIF4E1BA6NMX2 242 aaKnown RBP9.91□□□□□ -0.82
HDLBP-228ENST00000459788 PJA2O43164 708 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 KLK10O43240 276 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 NDUFA10O95299 355 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 ASMTLO95671 621 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 LIPCP11150 499 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 F3P13726 295 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 HLA-DPA1P20036 260 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 AK4P27144 223 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-228ENST00000459788 CD1CP29017 333 aa9.91□□□□□ -0.82
HDLBP-228ENST00000459788 CTNNA1P35221 906 aaKnown RBP9.91□□□□□ -0.82
HDLBP-228ENST00000459788 CETN2P41208 172 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms