RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TSTA3Q13630 321 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 ANGPT1Q15389 498 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TSC22D1Q15714 1073 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TBCEQ15813 527 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 TBR1Q16650 682 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SLC35G1Q2M3R5 365 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 HFEQ30201 348 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 MCMDC2Q4G0Z9 681 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD20A4Q4UJ75 823 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD20A8PQ5CZ79 823 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD20A2Q5SQ80 823 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ERMARDQ5T6L9 678 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD20A1Q5TYW2 823 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 KRT80Q6KB66 452 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ARMC6Q6NXE6 501 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 AFTPHQ6ULP2 937 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 LINC00696Q6ZRV3 163 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PIK3AP1Q6ZUJ8 805 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CXXC5Q7LFL8 322 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ZNF677Q86XU0 584 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 C1orf210Q8IVY1 113 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 MAP7D3Q8IWC1 876 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 DIS3L2Q8IYB7 885 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 CRYBG2Q8N1P7 616 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SCML4Q8N228 414 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 EIF1ADQ8N9N8 165 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 TTLQ8NG68 377 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PSMA8Q8TAA3 256 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ATP8B4Q8TF62 1192 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 HEXDCQ8WVB3 486 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 KCNE4Q8WWG9 221 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 JADE3Q92613 823 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PTPRN2Q92932 1015 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 AZIN2Q96A70 460 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 RHBDF1Q96CC6 855 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SPDL1Q96EA4 605 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 RNF125Q96EQ8 232 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ALG14Q96F25 216 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 C14orf79Q96F83 325 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 APIPQ96GX9 242 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 HES6Q96HZ4 224 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SCLYQ96I15 445 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 METTL2AQ96IZ6 378 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 ZBTB18Q99592 522 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 KCNS3Q9BQ31 491 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CCM2Q9BSQ5 444 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TDRD1Q9BXT4 1180 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 KLHL4Q9C0H6 718 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 NDEL1Q9GZM8 345 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 USP44Q9H0E7 712 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 EXO5Q9H790 373 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 IL26Q9NPH9 171 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ABCB8Q9NUT2 735 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SPTLC3Q9NUV7 552 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 THG1LQ9NWX6 298 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 ARHGEF38Q9NXL2 777 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 GALNT8Q9NY28 637 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SMPD3Q9NY59 655 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 MRPL15Q9P015 296 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 THEGQ9P2T0 379 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ATXN10Q9UBB4 475 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 DBF4Q9UBU7 674 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 TBX20Q9UMR3 447 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ERVK-11Q9UQG0 969 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SLC22A14Q9Y267 594 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PCDHGA5Q9Y5G8 931 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PCDHA8Q9Y5H6 950 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PSAT1Q9Y617 370 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 MAD1L1Q9Y6D9 718 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TOPAZ1Q8N9V7 1692 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ALS2Q96Q42 1657 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CDC42BPGQ6DT37 1551 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 AKAP12Q02952 1782 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 IQGAP3Q86VI3 1631 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PHRF1Q9P1Y6 1649 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 A0A075B6Q4 140 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 TCRBV16S1A1N1A0A5B0 115 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CCDC154A6NI56 674 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 H3BNC9 293 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 DNALI1O14645 258 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 LIN7AO14910 233 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 XPO1O14980 1071 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 FOXN1O15353 648 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 NARSO43776 548 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 SSX5O60225 188 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 MED24O75448 989 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CRCPO75575 148 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CTAG2O75638 210 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 AMY2AP04746 511 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SERPINF2P08697 491 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 FAM86B2P0C5J1 330 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 HSMCR30P0CW71 290 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CCDC192P0DO97 292 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 UMPSP11172 480 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 HOXB8P17481 243 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms