RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TWIST2Q8WVJ9 160 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 MRPL48Q96GC5 212 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 CRELD1Q96HD1 420 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 PPP3R2Q96LZ3 170 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 HPF1Q9NWY4 346 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 MKLN1Q9UL63 735 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 POU2F1P14859 743 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 CLCN5P51795 746 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 IL2P60568 153 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 GRM3Q14832 879 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 PSMD5Q16401 504 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 GPR180Q86V85 440 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 MMAAQ8IVH4 418 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 OR10A6Q8NH74 314 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 UTP4Q969X6 686 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 MND1Q9BWT6 205 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 CYP3A43Q9HB55 503 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 TAS2R9Q9NYW1 312 aa12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-208ENST00000456173 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 RNASEH2AO75792 299 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MAN2A2P49641 1150 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 NFATC3Q12968 1075 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 HSD17B12Q53GQ0 312 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 FOXR2Q6PJQ5 311 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 C4orf19Q8IY42 314 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 SVOPLQ8N434 492 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 C7orf57Q8NEG2 295 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 GANCQ8TET4 914 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 TMBIM1Q969X1 311 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ZFP3Q96NJ6 502 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 SLC30A2Q9BRI3 323 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 KCNE2Q9Y6J6 123 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 SLC30A4O14863 429 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ITGB1P05556 798 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CD48P09326 243 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ITGA2P17301 1181 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 TAF6P49848 677 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MTPNP58546 118 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CRY1Q16526 586 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ERMP1Q7Z2K6 904 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ADGRG6Q86SQ4 1221 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 LRFN2Q9ULH4 789 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 METTL21EPA6NDL7 271 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ARPC2O15144 300 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 XYLBO75191 536 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 GM2AP17900 193 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ANXA11P50995 505 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.448e-12■■■■■ 40.2
NEDD4L-208ENST00000456173 UGT8Q16880 541 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CHSY3Q70JA7 882 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MED8Q96G25 268 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 XKR8Q9H6D3 395 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 KCNQ5Q9NR82 932 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 KLHL28Q9NXS3 571 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MAT2BQ9NZL9 334 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MYL3P08590 195 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 RAP2AP10114 183 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 UQCRC1P31930 480 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 BMXP51813 675 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 UGT2B15P54855 530 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CRTC2Q53ET0 693 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 PIK3R6Q5UE93 754 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 TDRD10Q5VZ19 366 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 CDK20Q8IZL9 346 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 SNX27Q96L92 541 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 MUS81Q96NY9 551 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 TRMOQ9BU70 441 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 TRPM5Q9NZQ8 1165 aa12.29□□□□□ -0.44
NEDD4L-208ENST00000456173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ECHS1P30084 290 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CEBPGP53567 150 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 C10orf120Q5SQS8 335 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 FAM91A1Q658Y4 838 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 MED11Q9P086 117 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 DNAJB9Q9UBS3 223 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 AASSQ9UDR5 926 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms