RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 USP7Q93009 1102 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 SCAMP4Q969E2 229 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 CCDC97Q96F63 343 aaPredicted RBP12.87□□□□□ -0.35
TREX1-203ENST00000456089 TMEM74Q96NL1 305 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
TREX1-203ENST00000456089 AGAP2Q99490 1192 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 NUDT22Q9BRQ3 303 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 ADGRE3Q9BY15 652 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 PCDH9Q9HC56 1237 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 FOXJ2Q9P0K8 574 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 CHKBQ9Y259 395 aa12.87□□□□□ -0.35
TREX1-203ENST00000456089 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 CCDC66A2RUB6 948 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 PSMD11O00231 422 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 INPP4BO15327 924 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 MTSS1O43312 755 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 SOD1P00441 154 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 MPSTP25325 297 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 CTNNA2P26232 953 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 ADCY8P40145 1251 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 CD86P42081 329 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 GPR1P46091 355 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 COPS2P61201 443 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 CTBSQ01459 385 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 ZFP36L1Q07352 338 aaKnown RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
TREX1-203ENST00000456089 NKAIN2Q5VXU1 208 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 ALG1LQ6GMV1 187 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 TECPR1Q7Z6L1 1165 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 ZNF761Q86XN6 746 aaPredicted RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 SLITRK4Q8IW52 837 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 SYCE1Q8N0S2 351 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 JPH3Q8WXH2 748 aaPredicted RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 MCCC1Q96RQ3 725 aaPredicted RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 TDRD1Q9BXT4 1180 aaKnown RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 PRKAB1Q9Y478 270 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 PCYT1BQ9Y5K3 369 aaPredicted RBP12.86□□□□□ -0.35
TREX1-203ENST00000456089 DUSP10Q9Y6W6 482 aa12.86□□□□□ -0.35
TREX1-203ENST00000456089 hCG_1818297A0A087WSY0 165 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 A0A0J9YYE9 177 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 C9orf172C9J069 976 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 TMX2-CTNND1H3BSU7 103 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PPM1DO15297 605 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PJA2O43164 708 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 NUDT21O43809 227 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 NRDCO43847 1150 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 FZD6O60353 706 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 TRBC1P01850 177 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 CCL4P13236 92 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PNLIPP16233 465 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ZNF30P17039 623 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 ACTR1BP42025 376 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 RWDD2BP57060 319 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ACTR1AP61163 376 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PTSQ03393 145 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 EIF3IQ13347 325 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 PEX26Q7Z412 305 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 NAGSQ8N159 534 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 UBL4BQ8N7F7 174 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 ARRDC2Q8TBH0 407 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 SNRNP27Q8WVK2 155 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 AP2M1Q96CW1 435 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 DESI2Q9BSY9 194 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 HEMGNQ9BXL5 484 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 CEP41Q9BYV8 373 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 SLC17A4Q9Y2C5 497 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 PPIL1Q9Y3C6 166 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
TREX1-203ENST00000456089 SETXQ7Z333 2677 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 ZNF106Q9H2Y7 1883 aaKnown RBP12.85□□□□□ -0.35
TREX1-203ENST00000456089 H7C0C1 242 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms