RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SEMA5AQ13591 1074 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 N4BP2L1Q5TBK1 243 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 UNC5DQ6UXZ4 953 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ARMCX6Q7L4S7 300 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 C11orf74Q86VG3 221 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LAPTM4BQ86VI4 370 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 KSR1Q8IVT5 923 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 YAF2Q8IY57 180 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC52Q8N7C0 313 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PIH1D2Q8WWB5 315 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 MRM3Q9HC36 420 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SAGE1Q9NXZ1 904 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PLA2G4CQ9UP65 541 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM5Q9Y2B1 443 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PEAK1Q9H792 1746 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CNTNAP5Q8WYK1 1306 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 A0A0G2JMP0 313 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC85CA6NKD9 419 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TSTD3H0UI37 97 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF806P0C7X5 589 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PSKH1P11801 424 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CHRM3P20309 590 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ACTBP60709 375 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ACTG1P63261 375 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NFE2L1Q14494 772 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ATG14Q6ZNE5 492 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SLCO6A1Q86UG4 719 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 OR4M2Q8NGB6 313 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 OR4A15Q8NGL6 344 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 UFD1Q92890 307 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RIOK2Q9BVS4 552 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 BTG4Q9NY30 223 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 MAT2BQ9NZL9 334 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 GHRLQ9UBU3 117 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CLEC11AQ9Y240 323 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FAM50BQ9Y247 325 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FAM170AA1A519 330 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC14BA6NHZ5 514 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NRP2O60462 931 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 EIF2S3P41091 472 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 OMPP47874 163 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NAGLUP54802 743 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RAB4BP61018 213 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF280DQ6N043 979 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FIP1L1Q6UN15 594 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF507Q8TCN5 953 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GAD1Q99259 594 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM134Q9H6X4 195 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SARS2Q9NP81 518 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PTCH2Q9Y6C5 1203 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SYNJ2BP-COX16A0A087WUM0 186 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TEX51A0A1B0GUA7 166 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FGBP02675 491 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SOAT1P35610 550 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NOMO3P69849 1222 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NOMO1Q15155 1222 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KCNJ8Q15842 424 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TRABD2AQ86V40 505 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 VMP1Q96GC9 406 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KCTD7Q96MP8 289 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 S100A14Q9HCY8 104 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 COX16Q9P0S2 106 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CYTH4Q9UIA0 394 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NCKAP1Q9Y2A7 1128 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SAMHD1Q9Y3Z3 626 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SONP18583 2426 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 H0Y858 1186 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IRF6O14896 467 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ALOX15BO15296 676 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 OR6A2O95222 327 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IFNA1P01562 189 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 HLA-DRAP01903 254 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 EIF2DP41214 584 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 HALP42357 657 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TAMM41Q96BW9 452 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GPATCH1Q9BRR8 931 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 COPS4Q9BT78 406 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 COLEC11Q9BWP8 271 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KLHL42Q9P2K6 505 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SFMBT1Q9UHJ3 866 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 DMGDHQ9UI17 866 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 A0A087X0T9 212 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 DCDC2CA8MYV0 355 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 AP5Z1O43299 807 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TSC22D2O75157 780 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 HLA-DPB1P04440 258 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FGRP09769 529 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 COX4I1P13073 169 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GKP32189 559 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CHKAP35790 457 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TKTL1P51854 596 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IST1P53990 364 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 DLG2Q15700 870 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PARP15Q460N3 678 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GALNTL6Q49A17 601 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GPRC6AQ5T6X5 926 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SLC44A5Q8NCS7 719 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 MOAP1Q96BY2 351 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CXorf40BQ96DE9 158 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms