RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CCNJLQ8IV13 435 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 UBALD2Q8IYN6 164 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GJD3Q8N144 294 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 FBXO15Q8NCQ5 510 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 CD200R1Q8TD46 325 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ACMSDQ8TDX5 336 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 UBTD2Q8WUN7 234 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ANKRD49Q8WVL7 239 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CDKN2AIPNLQ96HQ2 116 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SIK2Q9H0K1 926 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SUV39H2Q9H5I1 410 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 IGFLR1Q9H665 355 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 TNFRSF12AQ9NP84 129 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SAYSD1Q9NPB0 183 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 RAB6BQ9NRW1 208 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 KLF15Q9UIH9 416 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 C16orf96A6NNT2 1141 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PRAMEF4O60810 478 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 F7P08709 466 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 PSMD8P48556 350 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GEMP55040 296 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PPP2CBP62714 309 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PPP2CAP67775 309 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CRADDP78560 199 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PDIA2Q13087 525 aaKnown RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 ZNF177Q13360 481 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 PDE1CQ14123 709 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 SIM2Q14190 667 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 CRY1Q16526 586 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ANO4Q32M45 955 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 UGT3A2Q3SY77 523 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PRAMEF9Q5VWM5 478 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PDPK2PQ6A1A2 396 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 TPRG1Q6ZUI0 275 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ZNF438Q7Z4V0 828 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ADGRG6Q86SQ4 1221 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PHYKPLQ8IUZ5 450 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SLC41A1Q8IVJ1 513 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CARNMT1Q8N4J0 409 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ARFGAP2Q8N6H7 521 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ATP11CQ8NB49 1132 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PLA2G15Q8NCC3 412 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ST13P5Q8NFI4 369 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 OR13C4Q8NGS5 318 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 OR2T3Q8NH03 318 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 STYXQ8WUJ0 223 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ZNF75CPQ92670 426 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 CERS2Q96G23 380 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ATOH8Q96SQ7 321 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 C2orf49Q9BVC5 232 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 CAAP1Q9H8G2 361 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CACNA2D2Q9NY47 1150 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 HEATR5BQ9P2D3 2071 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SYNJ2BP-COX16A0A087WUM0 186 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 A0A1W2PQ67 120 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 KANSL1LA0AUZ9 987 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CCDC189A1A4V9 331 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SDR42E2A6NKP2 422 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 DFFAO00273 331 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ANXA9O76027 345 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SLCO2B1O94956 709 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 POP4O95707 220 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 PDGFBP01127 241 aaPredicted RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 ALPIP09923 528 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PRR35P0CG20 571 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 FOSL2P15408 326 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CD1EP15812 388 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ZNF30P17039 623 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 GDI1P31150 447 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 IGFALSP35858 605 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 GMPRP36959 345 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SLC26A3P40879 764 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 CCR5P51681 352 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ARL4CP56559 192 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ZBTB16Q05516 673 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 IFRD2Q12894 506 aaPredicted RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 KRT72Q14CN4 511 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PON2Q15165 354 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 GRAMD4Q6IC98 578 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 NEK5Q6P3R8 708 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SBSNQ6UWP8 590 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 KIAA0408Q6ZU52 694 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 LYSMD3Q7Z3D4 306 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 GPR155Q7Z3F1 870 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 LINC00523Q86TU6 105 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ZBED8Q8IZ13 594 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PLD6Q8N2A8 252 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 STK40Q8N2I9 435 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 WDR34Q96EX3 536 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 RPL10LQ96L21 214 aaKnown RBP4.92□□□□□ -1.62
RIF1-207ENST00000454583 AGAP3Q96P47 875 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 LGR4Q9BXB1 951 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PCED1AQ9H1Q7 454 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 SLC6A17Q9H1V8 727 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 ABCG8Q9H221 673 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 TNKS2Q9H2K2 1166 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 TRABDQ9H4I3 376 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 NT5MQ9NPB1 228 aa4.92□□□□□ -1.62
RIF1-207ENST00000454583 PCDH12Q9NPG4 1184 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms