RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MATN3O15232 486 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 MYCLP1P12525 358 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 CCNCP24863 283 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 RBMS1P29558 406 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 ATP5OP48047 213 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 KCNJ1P48048 391 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PCBP4P57723 403 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 SLC10A2Q12908 348 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PTK6Q13882 451 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PRKD1Q15139 912 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PPP1R7Q15435 360 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 RAET1GQ6H3X3 334 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 HSD11B1LQ7Z5J1 315 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PELI3Q8N2H9 469 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 ZNF248Q8NDW4 579 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 CCDC74AQ96AQ1 378 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 HDAC11Q96DB2 347 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 DTD2Q96FN9 168 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 FERMT1Q9BQL6 677 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 TMEM168Q9H0V1 697 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 DPEP2Q9H4A9 486 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 SUDS3Q9H7L9 328 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 ANKZF1Q9H8Y5 726 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 PCDH9Q9HC56 1237 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 THSD1Q9NS62 852 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 RBM22Q9NW64 420 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■□□ 15.8
SQSTM1-204ENST00000453046 ENTPD2Q9Y5L3 495 aa17.95■□□□□ 0.46
SQSTM1-204ENST00000453046 RP1P56715 2156 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 PRSS38A1L453 326 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 PDHA1P08559 390 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 HOXB3P14651 431 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 CA4P22748 312 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 LHCGRP22888 699 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 CES1P23141 567 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 MCM3P25205 808 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 ERVPABLB-1P60509 514 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 DARS2Q6PI48 645 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 Q6ZVL8 140 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 TSPAN33Q86UF1 283 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 HEATR4Q86WZ0 1026 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 CCNYQ8ND76 341 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 TFB1MQ8WVM0 346 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 RTP4Q96DX8 246 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 GFM1Q96RP9 751 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 MCCC1Q96RQ3 725 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 CARS2Q9HA77 564 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 UTP11Q9Y3A2 253 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 PPIL1Q9Y3C6 166 aa17.94■□□□□ 0.46
SQSTM1-204ENST00000453046 EIF4E1BA6NMX2 242 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 B4DGG1 531 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 BHMG1C9JSJ3 638 aaPredicted RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 DXOO77932 396 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 RPLP0P05388 317 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 CCNB1P14635 433 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 TNFRSF8P28908 595 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 STIP1P31948 543 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 DSC2Q02487 901 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 PPIDQ08752 370 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 PTPRRQ15256 657 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 GSTA5Q7RTV2 222 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 CCDC89Q8N998 374 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 WDR36Q8NI36 951 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 PIH1D2Q8WWB5 315 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 SEC14L1Q92503 715 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 MAML1Q92585 1016 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 TSGA13Q96PP4 275 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 ERP44Q9BS26 406 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 TRIM51Q9BSJ1 452 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 TMEM121Q9BTD3 319 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 DMGDHQ9UI17 866 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 RABGEF1Q9UJ41 708 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 NEU2Q9Y3R4 380 aa17.93■□□□□ 0.46
SQSTM1-204ENST00000453046 NTN3O00634 580 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CASC3O15234 703 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 MTSS1O43312 755 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 FZD6O60353 706 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 GPR1P46091 355 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CCL7P80098 99 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 MRPS25P82663 173 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CDK3Q00526 305 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 SLC7A5Q01650 507 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 ILF3Q12906 894 aaKnown RBP eCLIP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 BROXQ5VW32 411 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 LRRC66Q68CR7 880 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 WDR93Q6P2C0 686 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 SPACA3Q8IXA5 215 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 IFT20Q8IY31 132 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CCDC13Q8IYE1 715 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CBARPQ8N350 705 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 ARL14Q8N4G2 192 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 Q8N9G6 341 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 GPR156Q8NFN8 814 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 CCL4L1Q8NHW4 92 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 LRRN4Q8WUT4 740 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 FATE1Q969F0 183 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 AP2M1Q96CW1 435 aa17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 FCRL3Q96P31 734 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-204ENST00000453046 TEX101Q9BY14 249 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms