RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SQSTM1Q13501 440 aa26.91■■□□□ 1.9
USP42-204ENST00000451154 CHST15Q7LFX5 561 aaPredicted RBP26.91■■□□□ 1.9
USP42-204ENST00000451154 PMEPA1Q969W9 287 aa26.91■■□□□ 1.9
USP42-204ENST00000451154 TAAR9Q96RI9 348 aa26.91■■□□□ 1.9
USP42-204ENST00000451154 MLPHQ9BV36 600 aaPredicted RBP26.91■■□□□ 1.9
USP42-204ENST00000451154 B3GNT4Q9C0J1 378 aa26.91■■□□□ 1.9
USP42-204ENST00000451154 FAM83DQ9H4H8 585 aa26.91■■□□□ 1.9
USP42-204ENST00000451154 ANKRD66B4E2M5 251 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 J3QKU1 62 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 WT1P19544 449 aaPredicted RBP26.9■■□□□ 1.9
USP42-204ENST00000451154 TRA2AQ13595 282 aaKnown RBP eCLIP26.9■■□□□ 1.9
USP42-204ENST00000451154 LRP8Q14114 963 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 ASTE1Q2TB18 679 aaPredicted RBP26.9■■□□□ 1.9
USP42-204ENST00000451154 RAVER1Q8IY67 606 aaKnown RBP26.9■■□□□ 1.9
USP42-204ENST00000451154 SFRP1Q8N474 314 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 CNTD1Q8N815 330 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 SLC37A2Q8TED4 501 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 EXTL1Q92935 676 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 HEY1Q9Y5J3 304 aa26.9■■□□□ 1.9
USP42-204ENST00000451154 FADS2P1A8MWK0 482 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 CD82P27701 267 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 MAN1A1P33908 653 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 PPM1FP49593 454 aaPredicted RBP26.89■■□□□ 1.9
USP42-204ENST00000451154 ARSDP51689 593 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 ZBTB17Q13105 803 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 HENMT1Q5T8I9 393 aaKnown RBP26.89■■□□□ 1.9
USP42-204ENST00000451154 OR8K1Q8NGG5 319 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 CCHCR1Q8TD31 782 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 ZNF830Q96NB3 372 aaPredicted RBP26.89■■□□□ 1.9
USP42-204ENST00000451154 SLC38A3Q99624 504 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 DEF6Q9H4E7 631 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 VPS18Q9P253 973 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 TBC1D29Q9UFV1 150 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 LCMT1Q9UIC8 334 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 PCDHGA4Q9Y5G9 962 aa26.89■■□□□ 1.9
USP42-204ENST00000451154 LRRD1A4D1F6 860 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 TMEM253P0C7T8 217 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 THRAP10827 490 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 CSTF2P33240 577 aaKnown RBP eCLIP26.88■■□□□ 1.89
USP42-204ENST00000451154 FASLGP48023 281 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 CYP4F2P78329 520 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 PPIDQ08752 370 aaKnown RBP26.88■■□□□ 1.89
USP42-204ENST00000451154 TMEM71Q6P5X7 295 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 KDELC2Q7Z4H8 507 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 PLD5Q8N7P1 536 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 AGBL5Q8NDL9 886 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 SLC35G2Q8TBE7 412 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 ART4Q93070 314 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 AHCYL2Q96HN2 611 aaKnown RBP26.88■■□□□ 1.89
USP42-204ENST00000451154 CEP41Q9BYV8 373 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 ASH1LQ9NR48 2969 aaKnown RBP26.88■■□□□ 1.89
USP42-204ENST00000451154 OCIAD1Q9NX40 245 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 PKD2L2Q9NZM6 624 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 KCNK6Q9Y257 313 aa26.88■■□□□ 1.89
USP42-204ENST00000451154 GPLD1P80108 840 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 IFI35P80217 286 aaPredicted RBP26.87■■□□□ 1.89
USP42-204ENST00000451154 AP1B1Q10567 949 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 GALNT3Q14435 633 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.87■■□□□ 1.89
USP42-204ENST00000451154 LYSMD3Q7Z3D4 306 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 ZSCAN1Q8NBB4 408 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 EID2BQ96D98 161 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 DPYSL5Q9BPU6 564 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 ARHGAP9Q9BRR9 750 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 ADGRE3Q9BY15 652 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 ARFGAP3Q9NP61 516 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 SLC39A1Q9NY26 324 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 B3GALT1Q9Y5Z6 326 aa26.87■■□□□ 1.89
USP42-204ENST00000451154 C3orf70A6NLC5 250 aaPredicted RBP26.86■■□□□ 1.89
USP42-204ENST00000451154 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.86■■□□□ 1.89
USP42-204ENST00000451154 STMND1H3BQB6 276 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 AKR1B10O60218 316 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 SNX2O60749 519 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 TPM3P06753 285 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 ACP5P13686 325 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 NFATC2Q13469 925 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 SNAP47Q5SQN1 464 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 IYDQ6PHW0 289 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 OR10G6Q8NH81 332 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 DNAJC7Q99615 494 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 MAK16Q9BXY0 300 aaKnown RBP26.86■■□□□ 1.89
USP42-204ENST00000451154 ZMYND15Q9H091 742 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 PCDHGA3Q9Y5H0 932 aa26.86■■□□□ 1.89
USP42-204ENST00000451154 RGSL1A5PLK6 1076 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 A8MU76 341 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 PYCARD-AS1I3L0S3 204 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 ITGB2P05107 769 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 PIRTP0C851 137 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 HHEXQ03014 270 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 ZNF648Q5T619 568 aaPredicted RBP26.85■■□□□ 1.89
USP42-204ENST00000451154 NPNTQ6UXI9 565 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 B4GALNT4Q76KP1 1039 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 FAM129CQ86XR2 697 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.85■■□□□ 1.89
USP42-204ENST00000451154 NKD1Q969G9 470 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 AGAP3Q96P47 875 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 CHP1Q99653 195 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 RMI1Q9H9A7 625 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 SHOC2Q9UQ13 582 aa26.85■■□□□ 1.89
USP42-204ENST00000451154 TLN1Q9Y490 2541 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms