RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 RAD18Q9NS91 495 aa11.77□□□□□ -0.52
RCL1-208ENST00000448872 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.52
RCL1-208ENST00000448872 MTRF1LQ9UGC7 380 aaKnown RBP11.77□□□□□ -0.52
RCL1-208ENST00000448872 RIMKLBQ9ULI2 386 aa11.77□□□□□ -0.52
RCL1-208ENST00000448872 OAS3Q9Y6K5 1087 aaKnown RBP11.77□□□□□ -0.52
RCL1-208ENST00000448872 A6NNZ2 444 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 EIF3HO15372 352 aaKnown RBP eCLIP11.76□□□□□ -0.53
RCL1-208ENST00000448872 PIAS1O75925 651 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 POLBP06746 335 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 THEGLP0DJG4 465 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TSHRP16473 764 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SSTR1P30872 391 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 FOXN2P32314 431 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TRIM23P36406 574 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 NUDT1P36639 197 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 POLD2P49005 469 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TUBB4BP68371 445 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PRAMEP78395 509 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 CDK3Q00526 305 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ZDHHC20Q5W0Z9 365 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 STEAP4Q687X5 459 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 KIAA0930Q6ICG6 404 aaPredicted RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 DOK6Q6PKX4 331 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 AFTPHQ6ULP2 937 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ADAMTSL4Q6UY14 1074 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 NLRP8Q86W28 1048 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SYT12Q8IV01 421 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
RCL1-208ENST00000448872 OR4L1Q8NH43 312 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PEX13Q92968 403 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ZSCAN5AQ9BUG6 496 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TEX101Q9BY14 249 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 CDH19Q9H159 772 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SEMA4AQ9H3S1 761 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 NINJ2Q9NZG7 142 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 APPL1Q9UKG1 709 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PNMA8BQ9ULN7 279 aaPredicted RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 HS3ST3A1Q9Y663 406 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SLC30A1Q9Y6M5 507 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 FAM169AQ9Y6X4 670 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ZNF318Q5VUA4 2279 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 NUMA1Q14980 2115 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 A0A1B0GVT2 93 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TMEM202A6NGA9 273 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SCAMP1O15126 338 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 EPN2O95208 641 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ITGALP20701 1170 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 CD38P28907 300 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 NBL1P41271 181 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 AFF3P51826 1226 aaKnown RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 BNC1Q01954 994 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 CACNG1Q06432 222 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 KYNUQ16719 465 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 ZNF542PQ5EBM4 170 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 GPRC6AQ5T6X5 926 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PEAR1Q5VY43 1037 aaPredicted RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TAS2R42Q7RTR8 314 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SNX20Q7Z614 316 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 SPATS2Q86XZ4 545 aaKnown RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 PALM2Q8IXS6 379 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 BTN2A2Q8WVV5 523 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 GLYATL1Q969I3 302 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 COX14Q96I36 57 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 C19orf43Q9BQ61 176 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 NAT9Q9BTE0 207 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 LRRC4CQ9HCJ2 640 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 CRLS1Q9UJA2 301 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 RAB23Q9ULC3 237 aa11.76□□□□□ -0.53
RCL1-208ENST00000448872 PCYT1BQ9Y5K3 369 aaPredicted RBP11.76□□□□□ -0.53
RCL1-208ENST00000448872 A0A1B0GTW7 788 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 TLR4O00206 839 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 CD3EAPO15446 510 aaKnown RBP11.75□□□□□ -0.53
RCL1-208ENST00000448872 SLC25A14O95258 325 aaPredicted RBP11.75□□□□□ -0.53
RCL1-208ENST00000448872 TTC4O95801 387 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 FUCA1P04066 466 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 CFIP05156 583 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 MPLP40238 635 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 RABIFP47224 123 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 B4GALNT1Q00973 533 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 FZD2Q14332 565 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 DBN1Q16643 649 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 HSP90AA5PQ58FG0 334 aa11.75□□□□□ -0.53
RCL1-208ENST00000448872 NEPROQ6NW34 567 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms