RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CCNJLQ8IV13 435 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 CDKL3Q8IVW4 592 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 FAM71DQ8N9W8 422 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 FAM46DQ8NEK8 389 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 TSGA13Q96PP4 275 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 NAP1L3Q99457 506 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 LRP4O75096 1905 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 TTC24A2A3L6 582 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 PMS2P1A4D2B8 440 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 TMEM202A6NGA9 273 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CASC3O15234 703 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZW10O43264 779 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZIC2O95409 532 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 JMJD7P0C870 316 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZSCAN5DPP0CG00 497 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CCNCP24863 283 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 COILP38432 576 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 RGRP47804 291 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 SCNN1BP51168 640 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 AP1S1P61966 158 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZFP36L1Q07352 338 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 WASHC5Q12768 1159 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 RALGDSQ12967 914 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ARHGEF7Q14155 803 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 LY6DQ14210 128 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CERCAMQ5T4B2 595 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 PNCKQ6P2M8 343 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 DPPA4Q7L190 304 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZSWIM9Q86XI8 627 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 JAMLQ86YT9 394 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 PGBD5Q8N414 524 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 PLA2G15Q8NCC3 412 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 OR1E3Q8WZA6 343 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 FUBP1Q96AE4 644 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 KRT12Q99456 494 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CMKLR1Q99788 373 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 FOXP3Q9BZS1 431 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 B3GNT4Q9C0J1 378 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 LRIT1Q9P2V4 623 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 SEPT3Q9UH03 358 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
PDLIM2-213ENST00000448520 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.22
PDLIM2-213ENST00000448520 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 HACD1B0YJ81 288 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 TRAFD1O14545 582 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 MATN3O15232 486 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 NUDT21O43809 227 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 NOBOXO60393 691 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 JCHAINP01591 159 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 PRKCGP05129 697 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 HLA-DQB2P05538 268 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 CCNB1P14635 433 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 PTPN3P26045 913 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 MAXP61244 160 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 PEX6Q13608 980 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 LBRQ14739 615 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 TCEA2Q15560 299 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 TRIP13Q15645 432 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 KIAA1614Q5VZ46 1190 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 BZW1Q7L1Q6 419 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 CNTD1Q8N815 330 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 MAML1Q92585 1016 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 PSKH2Q96QS6 385 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 SEMA4CQ9C0C4 833 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 TMEM168Q9H0V1 697 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 DPEP2Q9H4A9 486 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 L2HGDHQ9H9P8 463 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 CYP4F12Q9HCS2 524 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 AKAP7Q9P0M2 348 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-213ENST00000448520 SCN8AQ9UQD0 1980 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 EFSO43281 561 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 IFNB1P01574 187 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 PTGIRP43119 386 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 MMP13P45452 471 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 VPS41P49754 854 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 IFI35P80217 286 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 ACOX1Q15067 660 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms