RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 HDCP19113 662 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 AQP1P29972 269 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 THOP1P52888 689 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GRM3Q14832 879 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PPM1LQ5SGD2 360 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 RAET1GQ6H3X3 334 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TMPRSS11AQ6ZMR5 421 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 AHSA2Q719I0 299 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 XYLT1Q86Y38 959 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 DENND1CQ8IV53 801 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 HJURPQ8NCD3 748 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CLHC1Q8NHS4 586 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 COPS5Q92905 334 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ROPN1LQ96C74 230 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 KLHL5Q96PQ7 755 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GPN1Q9HCN4 374 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CHRAC1Q9NRG0 131 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PCDHGA4Q9Y5G9 962 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PEX16Q9Y5Y5 336 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 WASF2Q9Y6W5 498 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CASZ1Q86V15 1759 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 FOXO6A8MYZ6 492 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 E7ENX8 843 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 B4GALT5O43286 388 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CHST10O43529 356 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 B4GALT4O60513 344 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TBL1XO60907 577 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SCELO95171 688 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 IFNA16P05015 189 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CTPS1P17812 591 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CXCR3P49682 368 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 AQP4P55087 323 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 MANFP55145 182 aaKnown RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TAS2R41P59536 307 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 IL18Q14116 193 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 REP15Q6BDI9 236 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GPR65Q8IYL9 337 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 KLHL23Q8NBE8 558 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 LRTOMTQ8WZ04 291 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 BSNDQ8WZ55 320 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 FAM84AQ96KN4 292 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GSDMCQ9BYG8 508 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 FGFBP2Q9BYJ0 223 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TTYH3Q9C0H2 523 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SDCBP2Q9H190 292 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ABCB9Q9NP78 766 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PFDN2Q9UHV9 154 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF490Q9ULM2 529 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PDE10AQ9Y233 779 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GIT1Q9Y2X7 761 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 RBMX2Q9Y388 322 aaKnown RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PCDHB1Q9Y5F3 818 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PXDNQ92626 1479 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 NPEPPSL1A6NEC2 478 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SPATA31C2B4DYI2 1134 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CLDN5O00501 218 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 LSM1O15116 133 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AIREO43918 545 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 OR10H2O60403 315 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ACSL4O60488 711 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 LGR5O75473 907 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AP2A2O94973 939 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AP2A1O95782 977 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FGBP02675 491 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 RLN1P04808 185 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 S100A6P06703 90 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 EPHX2P34913 555 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MNDAP41218 407 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PTGIRP43119 386 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ASMTP46597 345 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 IL23RQ5VWK5 629 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ANKRD22Q5VYY1 191 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 DCLRE1AQ6PJP8 1040 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FAM151BQ6UXP7 276 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 UBE2R2Q712K3 238 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TAF8Q7Z7C8 310 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SATL1Q86VE3 508 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MON1AQ86VX9 555 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 RAB2BQ8WUD1 216 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 B3GNT5Q9BYG0 378 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 EBF3Q9H4W6 596 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TMPRSS4Q9NRS4 437 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TELO2Q9Y4R8 837 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TIMM22Q9Y584 194 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AGRPO00253 132 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MFSD11O43934 449 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PAGE1O75459 146 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SEMA3DO95025 777 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 C9P02748 559 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MT-ND1P03886 318 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FABP3P05413 133 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FESP07332 822 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CDH5P33151 784 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CCR3P51677 355 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ECT2LQ008S8 904 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 HSF2Q03933 536 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 LCP2Q13094 533 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ADGRE1Q14246 886 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 UGCGQ16739 394 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms