RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PTAR1Q7Z6K3 402 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PIP4P1Q86T03 277 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 DCP2Q8IU60 420 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PALM2Q8IXS6 379 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TRAM1L1Q8N609 369 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 MFSD2AQ8NA29 543 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TP53I13Q8NBR0 393 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 OR13C4Q8NGS5 318 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ZNF398Q8TD17 642 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PYROXD1Q8WU10 500 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PWWP2AQ96N64 755 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 KLF6Q99612 283 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 EBNA1BP2Q99848 306 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 SLC32A1Q9H598 525 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 EBF2Q9HAK2 575 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 SAYSD1Q9NPB0 183 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 GDF3Q9NR23 364 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 MBNL1Q9NR56 388 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PHPT1Q9NRX4 125 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 NFKBIL1Q9UBC1 381 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 FKBPLQ9UIM3 349 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 SOX13Q9UN79 622 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 SLCO1B1Q9Y6L6 691 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 CEP250Q9BV73 2442 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TNRC6BQ9UPQ9 1833 aaKnown RBP11.51□□□□□ -0.57
LINC00408-201ENST00000447784 SDK1Q7Z5N4 2213 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 A0A1B0GVT2 93 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 SRP72O76094 671 aaKnown RBP11.51□□□□□ -0.57
LINC00408-201ENST00000447784 PRAMEF1O95521 474 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 THEGLP0DJG4 465 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CD59P13987 128 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 GM2AP17900 193 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 TEAD1P28347 426 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 MC4RP32245 332 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 IGFALSP35858 605 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ELK3P41970 407 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 YPEL5P62699 121 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
LINC00408-201ENST00000447784 PTK2BQ14289 1009 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CHRNA6Q15825 494 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ANKRD20A4Q4UJ75 823 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ZRANB3Q5FWF4 1079 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 PSAPL1Q6NUJ1 521 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 AFTPHQ6ULP2 937 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CES3Q6UWW8 571 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ZDHHC24Q6UX98 284 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 KYAT3Q6YP21 454 aaKnown RBP11.51□□□□□ -0.57
LINC00408-201ENST00000447784 IQCHQ86VS3 1027 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ANKMY2Q8IV38 441 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 MPP5Q8N3R9 675 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 OTUD6BQ8N6M0 293 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 TMEM145Q8NBT3 493 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 OR2I1PQ8NGU4 316 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 DTX3LQ8TDB6 740 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 HDAC10Q969S8 669 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ULK4Q96C45 1275 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CFAP36Q96G28 342 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CDKN2AIPNLQ96HQ2 116 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 SIGLEC10Q96LC7 697 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 TBATAQ96M53 351 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 TTC25Q96NG3 672 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 FMO2Q99518 471 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ASB8Q9H765 288 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 RRAGDQ9NQL2 400 aaPredicted RBP11.51□□□□□ -0.57
LINC00408-201ENST00000447784 SLC2A6Q9UGQ3 507 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CRLS1Q9UJA2 301 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 NFU1Q9UMS0 254 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CHMP2BQ9UQN3 213 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 CA5BQ9Y2D0 317 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 ANKRD6Q9Y2G4 727 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 OR1A2Q9Y585 309 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 PCDHGB2Q9Y5G2 931 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 DNAH14Q0VDD8 3507 aa11.51□□□□□ -0.57
LINC00408-201ENST00000447784 LAMA1P25391 3075 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 CCDC162PA2VCL2 907 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 POM121BA6NF01 834 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 H7C0S8 307 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 TLR4O00206 839 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 CCL22O00626 93 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 PFDN6O15212 129 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 INPP4BO15327 924 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 TP73O15350 636 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 DFNA5O60443 496 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 USP1O94782 785 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 SLC25A14O95258 325 aaPredicted RBP11.5□□□□□ -0.57
LINC00408-201ENST00000447784 VAPBO95292 243 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 TUBBP07437 444 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 NMBRP28336 390 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 PMLP29590 882 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 PPARGP37231 505 aaPredicted RBP11.5□□□□□ -0.57
LINC00408-201ENST00000447784 CTSKP43235 329 aa11.5□□□□□ -0.57
LINC00408-201ENST00000447784 CARSP49589 748 aaKnown RBP11.5□□□□□ -0.57
LINC00408-201ENST00000447784 PFN3P60673 137 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms