RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FSTL5Q8N475 847 aaPredicted RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 CEP112Q8N8E3 955 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CPT1BQ92523 772 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PEX13Q92968 403 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 GLYATL1Q969I3 302 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 EID2BQ96D98 161 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 DCUN1D1Q96GG9 259 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 SNF8Q96H20 258 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 TBATAQ96M53 351 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 VPS35Q96QK1 796 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 RTKNQ9BST9 563 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 DUSP23Q9BVJ7 150 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 RMI1Q9H9A7 625 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 IL21RQ9HBE5 538 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CYP4F12Q9HCS2 524 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 IL26Q9NPH9 171 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 NLE1Q9NVX2 485 aaPredicted RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 VPS18Q9P253 973 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CRLS1Q9UJA2 301 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 ANAPC5Q9UJX4 755 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 NEU2Q9Y3R4 380 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 DGKBQ9Y6T7 804 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 LRRK1Q38SD2 2015 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CFAP99D6REC4 459 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 GOLGA8MH3BSY2 632 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 SLC30A4O14863 429 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 AQP9O43315 295 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 LDB2O43679 373 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 VEGFDO43915 354 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 SRP72O76094 671 aaKnown RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 AKT1P31749 480 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 GRIA1P42261 906 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 PTGIRP43119 386 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF140P52738 457 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ILF3Q12906 894 aaKnown RBP eCLIP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 EIF2B5Q13144 721 aaKnown RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 MORF4L2Q15014 288 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 CHRNA6Q15825 494 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 RSPO4Q2I0M5 234 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ALG11Q2TAA5 492 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 CCDC38Q502W7 563 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 PRRT3Q5FWE3 981 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ZRANB3Q5FWF4 1079 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 C8orf74Q6P047 294 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF572Q7Z3I7 529 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 GKN2Q86XP6 184 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 GALNT13Q8IUC8 556 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 OR13C4Q8NGS5 318 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 LMX1AQ8TE12 382 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 RHBDD1Q8TEB9 315 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 HEXDCQ8WVB3 486 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 GLMNQ92990 594 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 TSACCQ96A04 125 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 DNAJC1Q96KC8 554 aaKnown RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 AGAP2Q99490 1192 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 CDC6Q99741 560 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 LGR4Q9BXB1 951 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 TRIM31Q9BZY9 425 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 ASB8Q9H765 288 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 SUDS3Q9H7L9 328 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 CARS2Q9HA77 564 aaKnown RBP13.99□□□□□ -0.17
SSBP3-208ENST00000444533 TRIM39Q9HCM9 518 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 FKBPLQ9UIM3 349 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 RIMKLBQ9ULI2 386 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 TCAF1Q9Y4C2 921 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 MRFAP1Q9Y605 127 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 CSNK1G3Q9Y6M4 447 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
SSBP3-208ENST00000444533 PCDH15Q96QU1 1955 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 DMDP11532 3685 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 TMEM202A6NGA9 273 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 MROH6A6NGR9 719 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 SDR42E2A6NKP2 422 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 FADS2P1A8MWK0 482 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 F8W8V4 182 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 PFDN6O15212 129 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 SDC3O75056 442 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 PIAS2O75928 621 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 SOD1P00441 154 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 IVLP07476 585 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 ANXA6P08133 673 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 MSH3P20585 1137 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 DGKAP23743 735 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 MGAT1P26572 445 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 MC4RP32245 332 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 GNPDA1P46926 289 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 NFATC2Q13469 925 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 ATP13A5Q4VNC0 1218 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 TSTD2Q5T7W7 516 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 AFTPHQ6ULP2 937 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 KDM7AQ6ZMT4 941 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 MARK2Q7KZI7 788 aaKnown RBP13.98□□□□□ -0.17
SSBP3-208ENST00000444533 TAS2R42Q7RTR8 314 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 SNX20Q7Z614 316 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 NAXDQ8IW45 347 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 PDIK1LQ8N165 341 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 PELI3Q8N2H9 469 aa13.98□□□□□ -0.17
SSBP3-208ENST00000444533 OR6P1Q8NGX9 317 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms