RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 NEMP1O14524 444 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 CSPG5O95196 566 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 TSPAN12O95859 305 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 POU2F2P09086 479 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 CTSOP43234 321 aaPredicted RBP17.14■□□□□ 0.33
CCDC197-202ENST00000444118 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
CCDC197-202ENST00000444118 INHBCP55103 352 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 RAD51Q06609 339 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 PDCD2Q16342 344 aaPredicted RBP17.14■□□□□ 0.33
CCDC197-202ENST00000444118 UNC50Q53HI1 259 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
CCDC197-202ENST00000444118 AFAP1L2Q8N4X5 818 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 ENDOVQ8N8Q3 282 aaKnown RBP17.14■□□□□ 0.33
CCDC197-202ENST00000444118 STAG3L4Q8TBR4 150 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 CD200R1Q8TD46 325 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 FAM136AQ96C01 138 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 ASB2Q96Q27 587 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 CEP44Q9C0F1 390 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 TNKS2Q9H2K2 1166 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 TNFRSF12AQ9NP84 129 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
CCDC197-202ENST00000444118 TRBV5-4A0A0C4DH59 114 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 GRM6O15303 877 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 BMP1P13497 986 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 EPCAMP16422 314 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 GKP32189 559 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 IRS1P35568 1242 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 ZSWIM9Q86XI8 627 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 POU5F2Q8N7G0 328 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 GIMAP7Q8NHV1 300 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 IRF7Q92985 503 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 RPL10LQ96L21 214 aaKnown RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 CPEB1Q9BZB8 566 aaKnown RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 MEAF6Q9HAF1 191 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 PPIL1Q9Y3C6 166 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 PCDHB1Q9Y5F3 818 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 SLC30A1Q9Y6M5 507 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 C1orf232A0A0U1RR37 186 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 UBXN8O00124 270 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 UBFD1O14562 309 aaKnown RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 XYLBO75191 536 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 ENTPD5O75356 428 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 HNF1BP35680 557 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 RYBPQ8N488 228 aaPredicted RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 PCDH20Q8N6Y1 951 aaKnown RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 PTGR2Q8N8N7 351 aaPredicted RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 SLC30A3Q99726 388 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 TBC1D14Q9P2M4 693 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 TRMT6Q9UJA5 497 aaKnown RBP17.13■□□□□ 0.33
CCDC197-202ENST00000444118 APPL1Q9UKG1 709 aa17.13■□□□□ 0.33
CCDC197-202ENST00000444118 C2orf16Q68DN1 1984 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 TRANK1O15050 2925 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 PRMT5O14744 637 aaPredicted RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 GPR39O43194 453 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 KLK8O60259 260 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 CLASP2O75122 1294 aaKnown RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SUPT7LO94864 414 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 PRAMEF1O95521 474 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 RB1P06400 928 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 PABPC1P11940 636 aaKnown RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 COX4I1P13073 169 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 RPS3P23396 243 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 BTKQ06187 659 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 DMC1Q14565 340 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 RPS27LQ71UM5 84 aaKnown RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SNX20Q7Z614 316 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 ULK2Q8IYT8 1036 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 PELI3Q8N2H9 469 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 CBARPQ8N350 705 aaPredicted RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 ACTRT2Q8TDY3 377 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 FUBP1Q96AE4 644 aaKnown RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 PPP1R36Q96LQ0 422 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 BBS2Q9BXC9 721 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 C1QTNF3Q9BXJ4 246 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 MARK1Q9P0L2 795 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SLC25A13Q9UJS0 675 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 IKZF3Q9UKT9 509 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 L3MBTL1Q9Y468 752 aa17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.12■□□□□ 0.33
CCDC197-202ENST00000444118 SYCE1LA8MT33 242 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 MEI4A8MW99 385 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 NEDD8-MDP1E9PL57 170 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 ARHGEF15O94989 841 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 CLCN7P51798 805 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 NFATC2Q13469 925 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 MYLK3Q32MK0 819 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 ELMSAN1Q6PJG2 1045 aa17.11■□□□□ 0.33
CCDC197-202ENST00000444118 CHSY3Q70JA7 882 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms