RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 SIT1Q9Y3P8 196 aa15.81■□□□□ 0.12
MCF2L-217ENST00000441756 MTF2Q9Y483 593 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-217ENST00000441756 PCDHB1Q9Y5F3 818 aa15.81■□□□□ 0.12
MCF2L-217ENST00000441756 FAM95CA0A1B0GW59 222 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 UBA6A0AVT1 1052 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 LRRC72A6NJI9 287 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 AGAP14A8MT82 685 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 CFAP99D6REC4 459 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 H3BMM5 538 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 GAPDHSO14556 408 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 HAUS5O94927 633 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 RALBP11234 206 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ACRV1P26436 265 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 OAS2P29728 719 aaKnown RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 OXTRP30559 389 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ADPRHP54922 357 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ADARP55265 1226 aaKnown RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 TAS2R38P59533 333 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 POU4F1Q01851 419 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 DPTQ07507 201 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 FZD5Q13467 585 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 BMPR2Q13873 1038 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 AGERQ15109 404 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 MAP7D1Q3KQU3 841 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 SERPINA9Q86WD7 417 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 CYP4X1Q8N118 509 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 MZB1Q8WU39 189 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ATXN7L3BQ96GX2 97 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ELMO2Q96JJ3 720 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 VPS35Q96QK1 796 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 RIOK2Q9BVS4 552 aaKnown RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 BTBD1Q9H0C5 482 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 SLC6A17Q9H1V8 727 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ABCG8Q9H221 673 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 SSU72Q9NP77 194 aaKnown RBP15.8■□□□□ 0.12
MCF2L-217ENST00000441756 FAM53CQ9NYF3 392 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ZDHHC3Q9NYG2 299 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 PLXNA2O75051 1894 aa15.8■□□□□ 0.12
MCF2L-217ENST00000441756 ZNF217O75362 1048 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 APBB3O95704 486 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 IGLV3-19P01714 112 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 ESR1P03372 595 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 MPOP05164 745 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 TYK2P29597 1187 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 TPMTP51580 245 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 SGCGQ13326 291 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 SEMA3AQ14563 771 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 USP10Q14694 798 aaKnown RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 DBN1Q16643 649 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 ATP13A5Q4VNC0 1218 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 TAF1BQ53T94 588 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 LDLRAP1Q5SW96 308 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 CNSTQ6PJW8 725 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 PHYKPLQ8IUZ5 450 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 PIANPQ8IYJ0 282 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 GPATCH11Q8N954 259 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 OR2T34Q8NGX1 318 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 LPGAT1Q92604 370 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 ISL2Q96A47 359 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 COPS8Q99627 209 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 ZCCHC2Q9C0B9 1178 aaKnown RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 CLPBQ9H078 707 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 FAM96AQ9H5X1 160 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 ITM2CQ9NQX7 267 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 OGFRQ9NZT2 677 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 USP36Q9P275 1121 aaKnown RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 CD84Q9UIB8 345 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 SLC39A10Q9ULF5 831 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 SMG5Q9UPR3 1016 aaKnown RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 MTO1Q9Y2Z2 717 aaKnown RBP15.79■□□□□ 0.12
MCF2L-217ENST00000441756 XIRP2A4UGR9 3374 aa15.79■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3DA0A087WVF3 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3IA0A087WXS9 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3EA0A087X179 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3KA0A087X1G2 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3FA6NER0 549 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3LB9A6J9 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 QSOX1O00391 747 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 PRMT5O14744 637 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 RNGTTO60942 597 aaKnown RBP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3HP0C7X1 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 BRAFP15056 766 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 STMN1P16949 149 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 KRT4P19013 534 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 NR1D1P20393 614 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 RPS3P23396 243 aaKnown RBP eCLIP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 GABRB3P28472 473 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 CRABP2P29373 138 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 NSG1P42857 185 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3GQ6DHY5 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 RAET1GQ6H3X3 334 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3CQ6IPX1 549 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 ANO7Q6IWH7 933 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 LDB1Q86U70 411 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 EXOC3L1Q86VI1 746 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 HORMAD1Q86X24 394 aa15.78■□□□□ 0.12
MCF2L-217ENST00000441756 TBC1D3Q8IZP1 549 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-217ENST00000441756 DDHD1Q8NEL9 900 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms