RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 XYLT2Q9H1B5 865 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 CDC42EP4Q9H3Q1 356 aaKnown RBP6.49□□□□□ -1.37
HDAC6-210ENST00000441703 PCIF1Q9H4Z3 704 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 LRRC19Q9H756 370 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 SMYD3Q9H7B4 428 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 VRTNQ9H8Y1 702 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 ETNK2Q9NVF9 386 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 FAIMQ9NVQ4 179 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 EURLQ9NYK6 297 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 CLIC5Q9NZA1 410 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 FOXJ2Q9P0K8 574 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 AKAP7Q9P0M2 348 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-210ENST00000441703 SPATA7Q9P0W8 599 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 CHMP2BQ9UQN3 213 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 NAALADL1Q9UQQ1 740 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 PCDHB13Q9Y5F0 798 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 CSNK1G3Q9Y6M4 447 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 LRBAP50851 2863 aa6.49□□□□□ -1.37
HDAC6-210ENST00000441703 SPENQ96T58 3664 aaKnown RBP6.49□□□□□ -1.37
HDAC6-210ENST00000441703 EDDM13A0A1B0GTR0 161 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 HHLA1C9JL84 531 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 D6RAR5 112 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 E9PBE3 544 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 MKRN2OSH3BPM6 223 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 NTN3O00634 580 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SLC31A1O15431 190 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 GYG2O15488 501 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SLC7A4O43246 635 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 AQP9O43315 295 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 EXOC3O60645 756 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ZNF189O75820 626 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 HAUS5O94927 633 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TGDSO95455 350 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CBX6O95503 412 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CST3P01034 146 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CCDC130P13994 396 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 LIFP15018 202 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 UCHL3P15374 230 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 PON1P27169 355 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CCKBRP32239 447 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 MAN1A1P33908 653 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CCNFP41002 786 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 STAT1P42224 750 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 RPL5P46777 297 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 MAP3K7CLP57077 242 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 AP2B1P63010 937 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 PDE1BQ01064 536 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 EFEMP1Q12805 493 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 DCTN2Q13561 401 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ESPL1Q14674 2120 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 EIF2S3LQ2VIR3 472 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 DEFB109BQ30KR1 87 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TRMT5Q32P41 509 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 PDCD4Q53EL6 469 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CFAP157Q5JU67 520 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 PPP1R26Q5T8A7 1209 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 C6orf163Q5TEZ5 329 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 Q6ZNX1 250 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CLEC20AQ6ZU45 233 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 PTAR1Q7Z6K3 402 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CLNKQ7Z7G1 428 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 DCP2Q8IU60 420 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SCUBE1Q8IWY4 988 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 BBS5Q8N3I7 341 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ZNF557Q8N988 423 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TTC13Q8NBP0 860 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CCDC110Q8TBZ0 833 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SLC2A14Q8TDB8 520 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TMA16Q96EY4 203 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 C5orf34Q96MH7 638 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 BTBD9Q96Q07 612 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 CPEB1Q9BZB8 566 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SLC29A3Q9BZD2 475 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 INTS2Q9H0H0 1204 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 RMI1Q9H9A7 625 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 KIAA1586Q9HCI6 787 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TUBA8Q9NY65 449 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 TBC1D7Q9P0N9 293 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 MAP10Q9P2G4 905 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ZNHIT2Q9UHR6 403 aa6.48□□□□□ -1.37
HDAC6-210ENST00000441703 IPO11Q9UI26 975 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC6-210ENST00000441703 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 TMEM247A6NEH6 219 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 TMEM110-MUSTN1A8MSY1 372 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 C9orf172C9J069 976 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 TPP1O14773 563 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 NDC80O14777 642 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 CAPN5O15484 640 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-210ENST00000441703 PLRG1O43660 514 aaKnown RBP6.47□□□□□ -1.37
HDAC6-210ENST00000441703 BUD23O43709 281 aaKnown RBP6.47□□□□□ -1.37
HDAC6-210ENST00000441703 PEX1O43933 1283 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 CIB2O75838 187 aa6.47□□□□□ -1.37
HDAC6-210ENST00000441703 MTA2O94776 668 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms