RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 NFKBIL1Q9UBC1 381 aaPredicted RBP16.15■□□□□ 0.18
SNRPD3-204ENST00000439775 PISDQ9UG56 409 aa16.15■□□□□ 0.18
SNRPD3-204ENST00000439775 PLEKHM1Q9Y4G2 1056 aa16.15■□□□□ 0.18
SNRPD3-204ENST00000439775 OAS3Q9Y6K5 1087 aaKnown RBP16.15■□□□□ 0.18
SNRPD3-204ENST00000439775 ARHGEF17Q96PE2 2063 aaPredicted RBP16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 HGSO14964 777 aaPredicted RBP16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 ASMTLO95671 621 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 CD1CP29017 333 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 CDKN2BP42772 138 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 NR2C2P49116 596 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 SQSTM1Q13501 440 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 TFDP2Q14188 446 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 PRKD1Q15139 912 aaPredicted RBP16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 PHF19Q5T6S3 580 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 PCSK4Q6UW60 755 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 MFSD7Q6UXD7 560 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 BZW1Q7L1Q6 419 aaKnown RBP16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 LYSMD3Q7Z3D4 306 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 JAMLQ86YT9 394 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 SFRP1Q8N474 314 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 AGAP3Q96P47 875 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 B3GNT4Q9C0J1 378 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 ZFYVE1Q9HBF4 777 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 MAGEE1Q9HCI5 957 aa16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 AKAP7Q9P0M2 348 aaPredicted RBP16.14■□□□□ 0.17
SNRPD3-204ENST00000439775 IGHV1OR21-1A0A087WYE8 117 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 PPM1DO15297 605 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 C1QL1O75973 258 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 LCA5LO95447 670 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 ATP1A1P05023 1023 aaKnown RBP16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 LIPCP11150 499 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 ITIH1P19827 911 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 DYNLT1P63172 113 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 GPLD1P80108 840 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 TRA2AQ13595 282 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 TEX44Q53QW1 395 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 PDPK2PQ6A1A2 396 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 TC2NQ8N9U0 490 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 OR4D9Q8NGE8 314 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 SLC37A2Q8TED4 501 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 EID2BQ96D98 161 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 CCNL2Q96S94 520 aaPredicted RBP16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 DPYSL5Q9BPU6 564 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 NUDT22Q9BRQ3 303 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 ZSCAN5AQ9BUG6 496 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 CARD9Q9H257 536 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 GLOD4Q9HC38 313 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 RAD18Q9NS91 495 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 SEPT10Q9P0V9 454 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 ZNHIT2Q9UHR6 403 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 PCYT1BQ9Y5K3 369 aaPredicted RBP16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 SCN8AQ9UQD0 1980 aa16.13■□□□□ 0.17
SNRPD3-204ENST00000439775 A0A0A6YYK5 440 aaPredicted RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 PRAMEF33A0A0G2JMD5 474 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 IGHV5-10-1A0A0J9YXX1 117 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 GPR89AB7ZAQ6 455 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 PRAMEF10O60809 474 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 GPR89BP0CG08 455 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 TNNT1P13805 278 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 PTPN3P26045 913 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 CD82P27701 267 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 ETV5P41161 510 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 LIMK2P53671 638 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 CDK18Q07002 472 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 PCSK7Q16549 785 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 ZNF569Q5MCW4 686 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 ZNF574Q6ZN55 896 aaPredicted RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 CCDC81Q6ZN84 652 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 TFB1MQ8WVM0 346 aaKnown RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 CCDC74BQ96LY2 380 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 TEKT5Q96M29 485 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 SRPK1Q96SB4 655 aaKnown RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 HERPUD2Q9BSE4 406 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 SARS2Q9NP81 518 aaKnown RBP16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 KCNK4Q9NYG8 393 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 ZNF711Q9Y462 761 aa16.12■□□□□ 0.17
SNRPD3-204ENST00000439775 A6NCN8 305 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 C9orf172C9J069 976 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 MTSS1O43312 755 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 NUAK1O60285 661 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 CST8O60676 142 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 NDST3O95803 873 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 MT-CYBP00156 380 aaPredicted RBP16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 PRB1P04280 392 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 THRAP10827 490 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 SLC2A4P14672 509 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 CSF2RBP32927 897 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 MAGEA1P43355 309 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 C19orf57Q0VDD7 668 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 TFDP3Q5H9I0 405 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 SPOCD1Q6ZMY3 1216 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 USP53Q70EK8 1073 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 CHST15Q7LFX5 561 aaPredicted RBP16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 CCDC170Q8IYT3 715 aa16.11■□□□□ 0.17
SNRPD3-204ENST00000439775 KATNAL2Q8IYT4 538 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms