RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SFRP1Q8N474 314 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 TUBGCP5Q96RT8 1024 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ACTL8Q9H568 366 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 STN1Q9H668 368 aaKnown RBP11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ASF1BQ9NVP2 202 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 OR12D3Q9UGF7 316 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 KRT86O43790 486 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SCNN1AP37088 669 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 HHEXQ03014 270 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 RALGDSQ12967 914 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ACOX1Q15067 660 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 CPZQ66K79 652 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 RWDD4Q6NW29 188 aaKnown RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 CYB5D1Q6P9G0 228 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SYVN1Q86TM6 617 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ZNF761Q86XN6 746 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 RBMXL3Q8N7X1 1067 aaKnown RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SLC37A2Q8TED4 501 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 IQCDQ96DY2 449 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 LURAP1Q96LR2 239 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 GRPEL1Q9HAV7 217 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SARS2Q9NP81 518 aaKnown RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 UBE2TQ9NPD8 197 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ACP6Q9NPH0 428 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 LHX9Q9NQ69 397 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 KLHL3Q9UH77 587 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 ITGB1BP2Q9UKP3 347 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SLC17A4Q9Y2C5 497 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 SVILO95425 2214 aa11.07□□□□□ -0.64
CSTF3-203ENST00000438862 DIDO1Q9BTC0 2240 aaKnown RBP11.07□□□□□ -0.64
CSTF3-203ENST00000438862 CROCCQ5TZA2 2017 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 AKAP9Q99996 3911 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 TRBV23OR9-2A0A075B6M9 112 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 SSU72P8A0A1W2PR75 194 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 RASA4BC9J798 803 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 PRSS44E7EML9 344 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 TOX3O15405 576 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-203ENST00000438862 RASA4O43374 803 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 FGF5P12034 268 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 GM2AP17900 193 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 PTPN4P29074 926 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 PTGER4P35408 488 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 RPS15P62841 145 aaKnown RBP11.06□□□□□ -0.64
CSTF3-203ENST00000438862 CHAF1BQ13112 559 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 HSP90AA4PQ58FG1 418 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 MANEALQ5VSG8 457 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 DPPA4Q7L190 304 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 BNIPLQ7Z465 357 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 GDF7Q7Z4P5 450 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 FAM131BQ86XD5 332 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 ZSWIM9Q86XI8 627 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 XYLT1Q86Y38 959 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 CAMK1DQ8IU85 385 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 PASD1Q8IV76 773 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 PELI3Q8N2H9 469 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 CISD2Q8N5K1 135 aaKnown RBP11.06□□□□□ -0.64
CSTF3-203ENST00000438862 CT55Q8WUE5 264 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 SCARF2Q96GP6 870 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-203ENST00000438862 MRFAP1L1Q96HT8 127 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 OR6C1Q96RD1 312 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 RANBP9Q96S59 729 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 BRD8Q9H0E9 1235 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 VPS16Q9H269 839 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 LHX3Q9UBR4 397 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 LNPEPQ9UIQ6 1025 aa11.06□□□□□ -0.64
CSTF3-203ENST00000438862 POLEQ07864 2286 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 LRRTM2O43300 516 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 SPAG6O75602 509 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 C9P02748 559 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 TEAD1P28347 426 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 SERPINA4P29622 427 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 KRT9P35527 623 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 CSNK1DP48730 415 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 POLD2P49005 469 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 YBEYP58557 167 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 CDK3Q00526 305 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 UBXN1Q04323 297 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 CDK18Q07002 472 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 LRP8Q14114 963 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 CYTH1Q15438 398 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 EXOC3L4Q17RC7 722 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 PLEKHN1Q494U1 663 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSTF3-203ENST00000438862 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 SLC9B2Q86UD5 537 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 NETO2Q8NC67 525 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 FDCSPQ8NFU4 85 aa11.05□□□□□ -0.64
CSTF3-203ENST00000438862 NUS1Q96E22 293 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms