RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 KBTBD6Q86V97 674 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 SNX31Q8N9S9 440 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 RP9Q8TA86 221 aaKnown RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 SPPL3Q8TCT6 385 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 UBXN10Q96LJ8 280 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 CNBD2Q96M20 576 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 CDRT15Q96T59 188 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 DTNAQ9Y4J8 743 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 PDE4DIPQ5VU43 2346 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TBL1XO60907 577 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 LATS1O95835 1130 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 THOP1P52888 689 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 DNAJB13P59910 316 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 SEMA3AQ14563 771 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 CLEC6AQ6EIG7 209 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 CXorf57Q6NSI4 855 aaKnown RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 Q6ZNB5 142 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 SDCCAG8Q86SQ7 713 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 SETD3Q86TU7 594 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 CUZD1Q86UP6 607 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TRIM74Q86UV6 250 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TRIM73Q86UV7 250 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 JADE3Q92613 823 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 BHMTQ93088 406 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TADA1Q96BN2 335 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 ZNF599Q96NL3 588 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 NPAS2Q99743 824 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TLR9Q9NR96 1032 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 HCFC1R1Q9NWW0 138 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 TRPC5OSA6NMA1 111 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CBX4O00257 560 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 KDELR3O43731 214 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 ARHGEF15O94989 841 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CLPTM1O96005 669 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 C1RP00736 705 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 RBP1P09455 135 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 MYOGP15173 224 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 ACAP2Q15057 778 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 PTERQ96BW5 349 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 MUC3BQ9H195 1237 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 ASAH2Q9NR71 780 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 SMIM31A0A1B0GVY4 71 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CCDC162PA2VCL2 907 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CD3EAPO15446 510 aaKnown RBP13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 MAGEB3O15480 346 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 SUPT7LO94864 414 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 GLP2RO95838 553 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 DPP6P42658 865 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CLCN4P51793 760 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 MAP7Q14244 749 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF549Q6P9A3 640 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 BNC2Q6ZN30 1099 aaPredicted RBP13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CEP70Q8NHQ1 597 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 PIP4K2CQ8TBX8 421 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 SMIM14Q96QK8 99 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 CFAP97Q9P2B7 532 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 TMCO1Q9UM00 188 aa13.83□□□□□ -0.2
PTCHD3-201ENST00000438700 ANKRD12Q6UB98 2062 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 TRAV19A0A0A6YYK7 116 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 ATP6AP2A0A1C7CYW4 349 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 H0Y626 953 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 RFPL2O75678 378 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 ATP6AP2O75787 350 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 PENKP01210 267 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 SERPINF2P08697 491 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 TCN1P20061 433 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 IRS1P35568 1242 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 CCR2P41597 374 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 RGRP47804 291 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 MRPS22P82650 360 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 MYBPC1Q00872 1141 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 ART3Q13508 389 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 SLC14A2Q15849 920 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 C6orf52Q5T4I8 152 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 ISCA2Q86U28 154 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 HJURPQ8NCD3 748 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 CCDC126Q96EE4 140 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 MAELQ96JY0 434 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 PRPF18Q99633 342 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 CINPQ9BW66 212 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 SEPT3Q9UH03 358 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 PDLIM1O00151 329 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 CRTAMO95727 393 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms