RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 HENMT1Q5T8I9 393 aaKnown RBP18.01■□□□□ 0.47
GTF3A-204ENST00000438571 TMEM164Q5U3C3 297 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 ANKS6Q68DC2 871 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 NLRP8Q86W28 1048 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 FAM129CQ86XR2 697 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 LRRC49Q8IUZ0 686 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 NDUFAF2Q8N183 169 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 BMPERQ8N8U9 685 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 KCTD6Q8NC69 237 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 EXD1Q8NHP7 514 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 EID2BQ96D98 161 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 TSGA13Q96PP4 275 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 SLC12A9Q9BXP2 914 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 STARD5Q9NSY2 213 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 DTLQ9NZJ0 730 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 PCDHGA3Q9Y5H0 932 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 KCNK1O00180 336 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 ITGB2P05107 769 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 ACP5P13686 325 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 LIFP15018 202 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 SPINT3P49223 89 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 NFATC2Q13469 925 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 SQSTM1Q13501 440 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 TRA2AQ13595 282 aaKnown RBP eCLIP18■□□□□ 0.47
GTF3A-204ENST00000438571 TMEM71Q6P5X7 295 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 NRSN1Q8IZ57 195 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 CNTD1Q8N815 330 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 AGBL5Q8NDL9 886 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 RAPGEF5Q92565 580 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 HDAC11Q96DB2 347 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 RNF31Q96EP0 1072 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 LYSMD1Q96S90 227 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 SLC38A3Q99624 504 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 B3GNT4Q9C0J1 378 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 CTTNBP2NLQ9P2B4 639 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 ZNHIT2Q9UHR6 403 aa18■□□□□ 0.47
GTF3A-204ENST00000438571 SPENQ96T58 3664 aaKnown RBP17.99■□□□□ 0.47
GTF3A-204ENST00000438571 SPTA1P02549 2419 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 A6NCN8 305 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 PIRTP0C851 137 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 CASP14P31944 242 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 CSTF2P33240 577 aaKnown RBP eCLIP17.99■□□□□ 0.47
GTF3A-204ENST00000438571 PPM1FP49593 454 aaPredicted RBP17.99■□□□□ 0.47
GTF3A-204ENST00000438571 GPLD1P80108 840 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 HHEXQ03014 270 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 LYSMD3Q7Z3D4 306 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 CCDC13Q8IYE1 715 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 FATE1Q969F0 183 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 CTRCQ99895 268 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 FAM117AQ9C073 453 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 APMAPQ9HDC9 416 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 SLC39A1Q9NY26 324 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 VPS18Q9P253 973 aa17.99■□□□□ 0.47
GTF3A-204ENST00000438571 ZW10O43264 779 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 DUX1O43812 170 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 RAD1O60671 282 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 SNX2O60749 519 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 WISP1O95388 367 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 JCHAINP01591 159 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 SLC4A1P02730 911 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 PYGLP06737 847 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 MAPK9P45984 424 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 PEX6Q13608 980 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 LRP8Q14114 963 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 PDK2Q15119 407 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 NPNTQ6UXI9 565 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 IL22RA1Q8N6P7 574 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 PLD5Q8N7P1 536 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 ZSCAN1Q8NBB4 408 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 CCNYQ8ND76 341 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 AHCYL2Q96HN2 611 aaKnown RBP17.98■□□□□ 0.47
GTF3A-204ENST00000438571 DDA1Q9BW61 102 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 TBC1D10AQ9BXI6 508 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 CLMPQ9H6B4 373 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 PDP2Q9P2J9 529 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 ATXN10Q9UBB4 475 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 KLHL3Q9UH77 587 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 AMACRQ9UHK6 382 aa17.98■□□□□ 0.47
GTF3A-204ENST00000438571 LUC7L2Q9Y383 392 aaKnown RBP17.98■□□□□ 0.47
GTF3A-204ENST00000438571 HEMK1Q9Y5R4 338 aaPredicted RBP17.98■□□□□ 0.47
GTF3A-204ENST00000438571 ANKRD66B4E2M5 251 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 ZNF8P17098 575 aaPredicted RBP17.97■□□□□ 0.47
GTF3A-204ENST00000438571 KDELR1P24390 212 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 ATP1A2P50993 1020 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 PPIDQ08752 370 aaKnown RBP17.97■□□□□ 0.47
GTF3A-204ENST00000438571 PLA2G4EQ3MJ16 856 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 IYDQ6PHW0 289 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 KDELC2Q7Z4H8 507 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 CACNA2D3Q8IZS8 1091 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 OR10G6Q8NH81 332 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 RTP4Q96DX8 246 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 RNF157Q96PX1 679 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 MLPHQ9BV36 600 aaPredicted RBP17.97■□□□□ 0.47
GTF3A-204ENST00000438571 FAM83DQ9H4H8 585 aa17.97■□□□□ 0.47
GTF3A-204ENST00000438571 PKD2L2Q9NZM6 624 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms