RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 KIAA1143Q96AT1 154 aaPredicted RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 AP2M1Q96CW1 435 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 SCRN2Q96FV2 425 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 CCDC74BQ96LY2 380 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ZNF830Q96NB3 372 aaPredicted RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 SEMA3CQ99985 751 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 NUDT22Q9BRQ3 303 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 SYT11Q9BT88 431 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ANP32EQ9BTT0 268 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 FRMD8Q9BZ67 464 aaPredicted RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 ASPSCR1Q9BZE9 553 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 SEMA4CQ9C0C4 833 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 SEMA6CQ9H3T2 930 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ALG2Q9H553 416 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 SPATS2LQ9NUQ6 558 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 AIPL1Q9NZN9 384 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 FOXJ2Q9P0K8 574 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ANAPC7Q9UJX3 599 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 IGHV5-10-1A0A0J9YXX1 117 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 MYO1FO00160 1098 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 MAFKO60675 156 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 PPFIA2O75334 1257 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 FGF1P05230 155 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CEACAM5P06731 702 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 FAM87AP0C7U9 286 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 RARAP10276 462 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SKILP12757 684 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SLC2A4P14672 509 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ZNF30P17039 623 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CR2P20023 1033 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 LHCGRP22888 699 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CES1P23141 567 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 AK4P27144 223 aaPredicted RBP7.72□□□□□ -1.17
VPS50-204ENST00000438395 IL1R2P27930 398 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SOX11P35716 441 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ADCY8P40145 1251 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ETV5P41161 510 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ZNF165P49910 485 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 GPLD1P80108 840 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 B4GALNT1Q00973 533 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 C16orf72Q14CZ0 275 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 LRRC66Q68CR7 880 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ADAMTSL4Q6UY14 1074 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ATG14Q6ZNE5 492 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CYP4V2Q6ZWL3 525 aaPredicted RBP7.72□□□□□ -1.17
VPS50-204ENST00000438395 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 POLNQ7Z5Q5 900 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 TSPAN33Q86UF1 283 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 TRIM74Q86UV6 250 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 MAP7D3Q8IWC1 876 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SFTPA2Q8IWL1 248 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 NRSN1Q8IZ57 195 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 AVL9Q8NBF6 648 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 KCTD6Q8NC69 237 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 RCBTB1Q8NDN9 531 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 OR4D9Q8NGE8 314 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 JPH3Q8WXH2 748 aaPredicted RBP7.72□□□□□ -1.17
VPS50-204ENST00000438395 ART4Q93070 314 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 TAAR9Q96RI9 348 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 MCCC1Q96RQ3 725 aaPredicted RBP7.72□□□□□ -1.17
VPS50-204ENST00000438395 SLC38A3Q99624 504 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 BPIFA3Q9BQP9 254 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 NUP85Q9BW27 656 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 B3GNT4Q9C0J1 378 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 ETNK2Q9NVF9 386 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SLC39A1Q9NY26 324 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 RCOR3Q9P2K3 495 aaPredicted RBP7.72□□□□□ -1.17
VPS50-204ENST00000438395 ZNHIT2Q9UHR6 403 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CD84Q9UIB8 345 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 SLC17A4Q9Y2C5 497 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 TMEM98Q9Y2Y6 226 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
VPS50-204ENST00000438395 CHD5Q8TDI0 1954 aa7.71□□□□□ -1.17
VPS50-204ENST00000438395 C9orf172C9J069 976 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 PYCARD-AS1I3L0S3 204 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 INPP4BO15327 924 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 B4GAT1O43505 415 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 MFSD11O43934 449 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 WISP1O95388 367 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 TPM3P06753 285 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 CCL4P13236 92 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 GM2AP17900 193 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 CD1CP29017 333 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 GARSP41250 739 aaKnown RBP7.71□□□□□ -1.18
VPS50-204ENST00000438395 MAPK9P45984 424 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 POLD2P49005 469 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 RPL26P61254 145 aaKnown RBP7.71□□□□□ -1.18
VPS50-204ENST00000438395 DPTQ07507 201 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 IFI16Q16666 785 aaKnown RBP7.71□□□□□ -1.18
VPS50-204ENST00000438395 ODF2Q5BJF6 829 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 SNAP47Q5SQN1 464 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 DCAF12Q5T6F0 453 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 NKAIN2Q5VXU1 208 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 E4F1Q66K89 784 aaPredicted RBP7.71□□□□□ -1.18
VPS50-204ENST00000438395 ZNF765Q7L2R6 523 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 NRROSQ86YC3 692 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 PHYKPLQ8IUZ5 450 aa7.71□□□□□ -1.18
VPS50-204ENST00000438395 TP53INP2Q8IXH6 220 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms