RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DENRO43583 198 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TULP3O75386 442 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 RNASEH2AO75792 299 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PGK1P00558 417 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 OGNP20774 298 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 KRT20P35900 424 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TUFMP49411 452 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 DNAJB13P59910 316 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TUBA4AP68366 448 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ACSM2AQ08AH3 577 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF846Q147U1 533 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.343e-7■□□□□ 8.6
CSDE1-205ENST00000438362 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 INO80DQ53TQ3 878 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ACSM2BQ68CK6 577 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 CRTC3Q6UUV7 619 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 DLK2Q6UY11 383 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ERMP1Q7Z2K6 904 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 BNIPLQ7Z465 357 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 IFNLR1Q8IU57 520 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 CFAP52Q8N1V2 620 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF540Q8NDQ6 660 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 OLIG1Q8TAK6 271 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 MAPK15Q8TD08 544 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 GPR152Q8TDT2 470 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 MZB1Q8WU39 189 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 LRRC58Q96CX6 371 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SLC47A1Q96FL8 570 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TRIM45Q9H8W5 580 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 RPS6KA6Q9UK32 745 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SNX6Q9UNH7 406 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SLC27A5Q9Y2P5 690 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PCDHB9Q9Y5E1 797 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 U3KQV3 271 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ARL5CA6NH57 179 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 BTBD19C9JJ37 291 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 FZD9O00144 591 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 OR4F21O95013 312 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 OR56A5P0C7T3 313 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SLC35E2BP0CK96 405 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CES1P23141 567 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 RRM2P31350 389 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CDK9P50750 372 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 IL10RBQ08334 325 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 TAF10Q12962 218 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 FAM110CQ1W6H9 321 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 DEPDC1Q5TB30 811 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 NAPRTQ6XQN6 538 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 GPR180Q86V85 440 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SLC44A2Q8IWA5 706 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 TRPV3Q8NET8 790 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 RAET1EQ8TD07 263 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 MRPS31Q92665 395 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 OTUB1Q96FW1 271 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 HBEGFQ99075 208 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SORT1Q99523 831 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 EMILIN2Q9BXX0 1053 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 MFSD1Q9H3U5 465 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 TFB2MQ9H5Q4 396 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 FANCEQ9HB96 536 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 ACTR3BQ9P1U1 418 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CACNG4Q9UBN1 327 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 DUSP12Q9UNI6 340 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 PNMA8CA0A1B0GUJ8 204 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CCDC162PA2VCL2 907 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 ARPC2O15144 300 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 NADKO95544 446 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 ZBTB11O95625 1053 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 MTHFD1P11586 935 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 HOXB6P17509 224 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CHI3L1P36222 383 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 GNPDA1P46926 289 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 NRG1Q02297 640 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 PRKCQQ04759 706 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SFSWAPQ12872 951 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 NOMO2Q5JPE7 1267 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 HECTD3Q5T447 861 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 RPS27LQ71UM5 84 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 CTU1Q7Z7A3 348 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 ATAD1Q8NBU5 361 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 RBM4BQ9BQ04 359 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 TM6SF2Q9BZW4 377 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 WDR12Q9GZL7 423 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 FBRSL1Q9HCM7 1045 aaKnown RBP6.65□□□□□ -1.35
CSDE1-205ENST00000438362 ZDHHC7Q9NXF8 308 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 SELENONQ9NZV5 590 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.35
CSDE1-205ENST00000438362 MYOCOSA0A1B0GUC4 107 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 LINC00854A0A1B0GVQ3 168 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ELOVL7A1L3X0 281 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 A8MX80 341 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 G3V2L1 256 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IFRD1O00458 451 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TRIM24O15164 1050 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms