RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PTSQ03393 145 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 PAQR3Q6TCH7 311 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 TPRG1Q6ZUI0 275 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 GPR26Q8NDV2 337 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 PIWIL2Q8TC59 973 aaKnown RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 AGAP11Q8TF27 550 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 PTERQ96BW5 349 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 MCCC1Q96RQ3 725 aaPredicted RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 MYADMQ96S97 322 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 GPR21Q99679 349 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ASB8Q9H765 288 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 TRPV4Q9HBA0 871 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 HEY2Q9UBP5 337 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 EPB41L3Q9Y2J2 1087 aaPredicted RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 PPIL1Q9Y3C6 166 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 IQCF5A8MTL0 148 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 CHRNGP07510 517 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 T-ENOLP0DO92 83 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 KLC3Q6P597 504 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 ISCA2Q86U28 154 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 AGR3Q8TD06 166 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 UTP4Q969X6 686 aaKnown RBP20.99■□□□□ 0.95
PTPRF-207ENST00000436724 TXLNGQ9NUQ3 528 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 DEC1Q9P2X7 70 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 B4GALT6Q9UBX8 382 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 H3BMM5 538 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 PKMP14618 531 aaKnown RBP20.99■□□□□ 0.95
PTPRF-207ENST00000436724 SERPINB3P29508 390 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 NFATC2Q13469 925 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 ACAP2Q15057 778 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 AARS2Q5JTZ9 985 aaKnown RBP20.99■□□□□ 0.95
PTPRF-207ENST00000436724 EP400NLQ6ZTU2 488 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 SERPINA9Q86WD7 417 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 ZNF781Q8N8C0 355 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 KIAA1958Q8N8K9 716 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 PPP4R1Q8TF05 950 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 KXD1Q9BQD3 176 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 EBF4Q9BQW3 602 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 BOCQ9BWV1 1114 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 CYP4F12Q9HCS2 524 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 TAS2R13Q9NYV9 303 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 CLEC1BQ9P126 229 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 MCM8Q9UJA3 840 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 L3MBTL1Q9Y468 752 aa20.99■□□□□ 0.95
PTPRF-207ENST00000436724 GLYATL1P3A0A0U1RQE8 302 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 DCTN3O75935 186 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 HSPA4LO95757 839 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 CD1DP15813 335 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 HOXB8P17481 243 aaPredicted RBP20.98■□□□□ 0.95
PTPRF-207ENST00000436724 KPNA2P52292 529 aaKnown RBP20.98■□□□□ 0.95
PTPRF-207ENST00000436724 CHRNA6Q15825 494 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 PLPP6Q8IY26 295 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 TDHQ8IZJ6 230 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 SREK1Q8WXA9 508 aaKnown RBP20.98■□□□□ 0.95
PTPRF-207ENST00000436724 PRR11Q96HE9 360 aaPredicted RBP20.98■□□□□ 0.95
PTPRF-207ENST00000436724 ZDHHC4Q9NPG8 344 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 THG1LQ9NWX6 298 aaKnown RBP20.98■□□□□ 0.95
PTPRF-207ENST00000436724 PLA2G4CQ9UP65 541 aa20.98■□□□□ 0.95
PTPRF-207ENST00000436724 ATP5HO75947 161 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SRPRAP08240 638 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 HLA-EP13747 358 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 ALYREFQ86V81 257 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SIDT2Q8NBJ9 832 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 WFIKKN2Q8TEU8 576 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SHCBP1LQ9BZQ2 653 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 POMKQ9H5K3 350 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 KCNK4Q9NYG8 393 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 HAO1Q9UJM8 370 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SLC8A2Q9UPR5 921 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 VPS9D1Q9Y2B5 631 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 EZRP15311 586 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 TARSP26639 723 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SLC26A3P40879 764 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 PTGER3P43115 390 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 PFKPQ01813 784 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 GRAMD4Q6IC98 578 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 MAVSQ7Z434 540 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 SNX20Q7Z614 316 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 CCNYL1Q8N7R7 359 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 ABCG8Q9H221 673 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 LRMDAQ9H2I8 198 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 POPDC3Q9HBV1 291 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 OBP2AQ9NY56 170 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 IL36AQ9UHA7 158 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 APPL1Q9UKG1 709 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 COL4A3Q01955 1670 aa20.97■□□□□ 0.95
PTPRF-207ENST00000436724 ZNF106Q9H2Y7 1883 aaKnown RBP20.97■□□□□ 0.95
PTPRF-207ENST00000436724 KIF26AQ9ULI4 1882 aaPredicted RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 A8MT66 165 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 PFDN6O15212 129 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 TBX10O75333 385 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ASLP04424 464 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 RBP1P09455 135 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 SPAM1P38567 509 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ST8SIA6P61647 398 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 FCHO2Q0JRZ9 810 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ADAM15Q13444 863 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ARL13AQ5H913 290 aaPredicted RBP20.96■□□□□ 0.95
PTPRF-207ENST00000436724 ATAT1Q5SQI0 421 aa20.96■□□□□ 0.95
PTPRF-207ENST00000436724 RPS27LQ71UM5 84 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms