RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CA5AP35218 305 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 CDKN1CP49918 316 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 C21orf59P57076 290 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 CDK3Q00526 305 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 CRYMQ14894 314 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 TEAD4Q15561 434 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 SPANXN3Q5MJ09 141 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 ZNF648Q5T619 568 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 LAIR1Q6GTX8 287 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 AFTPHQ6ULP2 937 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 KYAT3Q6YP21 454 aaKnown RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 UNC5AQ6ZN44 842 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 UNC5BQ8IZJ1 945 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 PEX13Q92968 403 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 NAT9Q9BTE0 207 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 LGR4Q9BXB1 951 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 SMOC1Q9H4F8 434 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 PPANQ9NQ55 473 aaKnown RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 FSCN3Q9NQT6 498 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 C20orf96Q9NUD7 363 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 NFKBIL1Q9UBC1 381 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 GMEB2Q9UKD1 530 aa15.24■□□□□ 0.03
CNOT9-205ENST00000433439 TNRC6BQ9UPQ9 1833 aaKnown RBP15.24■□□□□ 0.03
CNOT9-205ENST00000433439 A0A1B0GVT2 93 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PRR5-ARHGAP8B1AHC4 643 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PATE3B3GLJ2 98 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 H7C0S8 307 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 CACNB4O00305 520 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 MTX2O75431 263 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 EPN2O95208 641 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 TTC4O95801 387 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PYGLP06737 847 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 FAM153BP0C7A2 387 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 MYBL2P10244 700 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 SSTR1P30872 391 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 MPLP40238 635 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 RABIFP47224 123 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 AFF3P51826 1226 aaKnown RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PFN3P60673 137 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 VSNL1P62760 191 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 ACVR1Q04771 509 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 CACNG1Q06432 222 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 NFATC2Q13469 925 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 THOC5Q13769 683 aaKnown RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PDE1CQ14123 709 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 FAM153CQ494X1 144 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 FASTKD1Q53R41 847 aaKnown RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 KIAA0930Q6ICG6 404 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PSAPL1Q6NUJ1 521 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 ENPP7Q6UWV6 458 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 SNX20Q7Z614 316 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 TMEM135Q86UB9 458 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 NLRP8Q86W28 1048 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 CCNJLQ8IV13 435 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 PNPLA1Q8N8W4 532 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 MFSD2AQ8NA29 543 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 SUMF1Q8NBK3 374 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 OR4L1Q8NH43 312 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 C1orf216Q8TAB5 229 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 BTN2A2Q8WVV5 523 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 GLYATL1Q969I3 302 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 FUBP1Q96AE4 644 aaKnown RBP15.23■□□□□ 0.03
CNOT9-205ENST00000433439 HIC2Q96JB3 615 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 LOXL4Q96JB6 756 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 VPS37BQ9H9H4 285 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 CATSPERZQ9NTU4 200 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 NCDNQ9UBB6 729 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 TMEM98Q9Y2Y6 226 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 WDFY4Q6ZS81 3184 aa15.23■□□□□ 0.03
CNOT9-205ENST00000433439 ZCWPW2A0A1B0GU75 182 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 A0A1W2PR77 199 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 TLR4O00206 839 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 SCAMP1O15126 338 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 ERVK-10P10266 1014 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 HTR1BP28222 390 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 AKT1P31749 480 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 FOXN2P32314 431 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 DPP6P42658 865 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 LONRF1Q17RB8 773 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 DUOXA1Q1HG43 343 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 TPRG1LQ5T0D9 272 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 CCNI2Q6ZMN8 369 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-205ENST00000433439 MARK2Q7KZI7 788 aaKnown RBP15.22■□□□□ 0.03
CNOT9-205ENST00000433439 RD3Q7Z3Z2 195 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 LDB1Q86U70 411 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-205ENST00000433439 SERPINA9Q86WD7 417 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 TEX101Q9BY14 249 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 PARD6BQ9BYG5 372 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 TMPRSS11EQ9UL52 423 aa15.22■□□□□ 0.03
CNOT9-205ENST00000433439 CNOT6Q9ULM6 557 aaKnown RBP15.22■□□□□ 0.03
CNOT9-205ENST00000433439 ZNF106Q9H2Y7 1883 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms