RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRNAU1APQ9NX07 287 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARHGEF38Q9NXL2 777 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 WDR35Q9P2L0 1181 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC9A2Q9UBY0 812 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRPV2Q9Y5S1 764 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 FANCD2Q9BXW9 1451 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 hCG_1809904A0A1W2PP81 198 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A1W2PPE2 198 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A1W2PR64 198 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 MAGEB17A8MXT2 336 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 AKR1B15C9JRZ8 316 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 RGS14O43566 566 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPRY3O43610 288 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 NDUFS7O75251 213 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 MOSPD3O75425 235 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 PSMD10O75832 226 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 TOMM70O94826 608 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 RPN1P04843 607 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 QDPRP09417 244 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 G6PDP11413 515 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 UGT1A1P22309 533 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ME1P48163 572 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 LIG4P49917 911 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 MXI1P50539 228 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 HNRNPH2P55795 449 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 UBXN2AP68543 259 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ALCAMQ13740 583 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 IL11RAQ14626 422 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 MVPQ14764 893 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 EZH2Q15910 746 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 MTX3Q5HYI7 312 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 C1orf141Q5JVX7 400 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 FAM109BQ6ICB4 259 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SYCE2Q6PIF2 218 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 PAPD4Q6PIY7 484 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SHC4Q6S5L8 630 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 B3GNT6Q6ZMB0 384 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SDCCAG8Q86SQ7 713 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 Q8NFD4 153 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 OR1J2Q8NGS2 313 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 WFIKKN2Q8TEU8 576 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 LPAR1Q92633 364 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 APBB2Q92870 758 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 TAAR8Q969N4 342 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 GRAMD2BQ96HH9 432 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 CNDP2Q96KP4 475 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 TTC14Q96N46 770 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 LRFN5Q96NI6 719 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ANKRD2Q9GZV1 360 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLCO5A1Q9H2Y9 848 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ST6GALNAC4Q9H4F1 302 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 SEBOXQ9HB31 216 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 CPSF2Q9P2I0 782 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 OR14J1Q9UGF5 321 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 OSGIN1Q9UJX0 560 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZHX1Q9UKY1 873 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 CDC14AQ9UNH5 594 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF148Q9UQR1 794 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 R3HDM2Q9Y2K5 976 aaKnown RBP3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 IFT140Q96RY7 1462 aa3.15□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A1W2PP11 408 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TRBC2A0A5B9 178 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 FAM90A26D6RGX4 464 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 APOA4P06727 396 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 ABCB1P08183 1280 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 NAGAP17050 411 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CD38P28907 300 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 EEF1DP29692 281 aaKnown RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 MSH2P43246 934 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCR3P51677 355 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 BRWD1-AS2P59051 145 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SIRPAP78324 504 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 ABATP80404 500 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 DDR1Q08345 913 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 Q0VFX4 171 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 GPS2Q13227 327 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 KLF9Q13886 244 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SCARB2Q14108 478 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 GPR18Q14330 331 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTGR1Q14914 329 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 PSMD6Q15008 389 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SMN1Q16637 294 aaKnown RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SYT16Q17RD7 645 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 LEXMQ3ZCV2 418 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 ATP13A5Q4VNC0 1218 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 MANEAQ5SRI9 462 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 DHRS7BQ6IAN0 325 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 C11orf87Q6NUJ2 197 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 IL27RAQ6UWB1 636 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TPRG1Q6ZUI0 275 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 C1QL2Q7Z5L3 287 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 IRF2BP2Q7Z5L9 587 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 MRPL10Q7Z7H8 261 aaKnown RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLFN11Q7Z7L1 901 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CEP57Q86XR8 500 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CEP97Q8IW35 865 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TC2NQ8N9U0 490 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms