RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LDB1Q86U70 411 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 BANPQ8N9N5 519 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 GPR26Q8NDV2 337 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 RPLP0P6Q8NHW5 317 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 CABS1Q96KC9 395 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 CD248Q9HCU0 757 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 KCNK9Q9NPC2 374 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 DLGAP2Q9P1A6 1054 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 FNDC3AQ9Y2H6 1198 aaKnown RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 CACNA1AO00555 2505 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF292O60281 2723 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TMEM120BA0PK00 339 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 AGAP14A8MT82 685 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 MID1O15344 667 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 AP1G1O43747 822 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 PRSS56P0CW18 603 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TYK2P29597 1187 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 POU4F1Q01851 419 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 CNTN1Q12860 1018 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 PIP5KL1Q5T9C9 394 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 LYPLAL1Q5VWZ2 237 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 HSD11B1LQ7Z5J1 315 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 PIANPQ8IYJ0 282 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 APOPT1Q96IL0 206 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 KLF6Q99612 283 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 TTC1Q99614 292 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ASB8Q9H765 288 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 SNX15Q9NRS6 342 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 MMP17Q9ULZ9 603 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 SCML1Q9UN30 329 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 NDRG2Q9UN36 371 aaKnown RBP18.13■□□□□ 0.49
HMGN1-206ENST00000431390 ITM2BQ9Y287 266 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
HMGN1-206ENST00000431390 LRRK1Q38SD2 2015 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 FAM47DPA6NHR8 397 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 GOLGA8RI6L899 631 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 NDUFS3O75489 264 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 MPOP05164 745 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 SP9P0CG40 484 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 CD72P21854 359 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 CDKN1CP49918 316 aaPredicted RBP18.12■□□□□ 0.49
HMGN1-206ENST00000431390 CSRP3P50461 194 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ATP1A2P50993 1020 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ADARP55265 1226 aaKnown RBP18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ZBTB16Q05516 673 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ITGA9Q13797 1035 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 USP10Q14694 798 aaKnown RBP18.12■□□□□ 0.49
HMGN1-206ENST00000431390 CHRNA6Q15825 494 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 FAM45BPQ6NSW5 357 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 DGLUCYQ7Z3D6 616 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 TECPR1Q7Z6L1 1165 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 NRSN1Q8IZ57 195 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 SYNPOQ8N3V7 929 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 AADATQ8N5Z0 425 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 FAM45AQ8TCE6 357 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF398Q8TD17 642 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 LPGAT1Q92604 370 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 ERLEC1Q96DZ1 483 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 FOXQ1Q9C009 403 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 SLC39A10Q9ULF5 831 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 MRPS17Q9Y2R5 130 aaKnown RBP18.12■□□□□ 0.49
HMGN1-206ENST00000431390 FADS3Q9Y5Q0 445 aa18.12■□□□□ 0.49
HMGN1-206ENST00000431390 PLXNB3Q9ULL4 1909 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 PLK4O00444 970 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 SPAG7O75391 227 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 DNTTP04053 509 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 LIG3P49916 1009 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 GYS2P54840 703 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 CREB5Q02930 508 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 LRRC32Q14392 662 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 AGBL4Q5VU57 503 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 ZC3H14Q6PJT7 736 aaKnown RBP18.11■□□□□ 0.49
HMGN1-206ENST00000431390 TAS2R42Q7RTR8 314 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 CYP2U1Q7Z449 544 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 TMPRSS6Q8IU80 811 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 C1orf210Q8IVY1 113 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF687Q8N1G0 1237 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 HDDC3Q8N4P3 179 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 GPATCH11Q8N954 259 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 FAM131CQ96AQ9 280 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 SHDQ96IW2 340 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 COQ10AQ96MF6 247 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 OMDQ99983 421 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 MKRN2Q9H000 416 aaKnown RBP18.11■□□□□ 0.49
HMGN1-206ENST00000431390 FAM83DQ9H4H8 585 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 FAM96AQ9H5X1 160 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 PCMTD2Q9NV79 361 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 NKIRAS1Q9NYS0 192 aa18.11■□□□□ 0.49
HMGN1-206ENST00000431390 BPTFQ12830 3046 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 NEMP1O14524 444 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 COPEO14579 308 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 TM9SF1O15321 606 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 ZWINTO95229 277 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CHRNB1P11230 501 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 PTGER3P43115 390 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CCT5P48643 541 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 STARD6P59095 220 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 ZKSCAN8Q15776 578 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-206ENST00000431390 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms