RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TMTC1Q8IUR5 882 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 SPACA3Q8IXA5 215 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 LRRC57Q8N9N7 239 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 EXD1Q8NHP7 514 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 TFB1MQ8WVM0 346 aaKnown RBP12.42□□□□□ -0.42
SMPD4-204ENST00000430682 ALG3Q92685 438 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 MRGPRX2Q96LB1 330 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 SLC46A1Q96NT5 459 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMPD4-204ENST00000430682 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 GFM1Q96RP9 751 aaKnown RBP12.42□□□□□ -0.42
SMPD4-204ENST00000430682 GSDMCQ9BYG8 508 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 ZNF711Q9Y462 761 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 PCDHA3Q9Y5H8 950 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 BAHCC1Q9P281 2608 aa12.42□□□□□ -0.42
SMPD4-204ENST00000430682 PIKFYVEQ9Y2I7 2098 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 LOC285095A0A1B0GVY8 99 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CDRT15L2A8MXV6 281 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ASMTLO95671 621 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 NDST3O95803 873 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 SLC4A1P02730 911 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 BPIP17213 487 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CA4P22748 312 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ACTR1BP42025 376 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 WNT3AP56704 352 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ACTR1AP61163 376 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CFHR1Q03591 330 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 TLE3Q04726 772 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ZFP36L1Q07352 338 aaKnown RBP12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ILF3Q12906 894 aaKnown RBP eCLIP12.41□□□□□ -0.428e-7■■■□□ 15
SMPD4-204ENST00000430682 OLIG2Q13516 323 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 PPP2R5EQ16537 467 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ODF2Q5BJF6 829 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ZNF438Q7Z4V0 828 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 SLITRK4Q8IW52 837 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 TTC30BQ8N4P2 665 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 P3H4Q92791 437 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-204ENST00000430682 DESI2Q9BSY9 194 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ADGRE3Q9BY15 652 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 SEMA6CQ9H3T2 930 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 PRORYQ9H606 182 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ZFYVE1Q9HBF4 777 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 RDH14Q9HBH5 336 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 MAGEE1Q9HCI5 957 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 EPB41L5Q9HCM4 733 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 BPIFA1Q9NP55 256 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 PKD2L2Q9NZM6 624 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
SMPD4-204ENST00000430682 CCDC187A0A096LP49 1063 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 BTNL10A8MVZ5 291 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 TNFSF15O95150 251 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 PYGMP11217 842 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 PNLIPP16233 465 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 CTNNA2P26232 953 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 RBL1P28749 1068 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 CD1CP29017 333 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 ETV5P41161 510 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 ABCG1P45844 678 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 VAV2P52735 878 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 SIRPB2Q5JXA9 342 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 NKAIN2Q5VXU1 208 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 IGF2-ASQ6U949 168 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 MICALCLQ6ZW33 695 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 USP53Q70EK8 1073 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 CHST15Q7LFX5 561 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 ZNF761Q86XN6 746 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 RAVER1Q8IY67 606 aaKnown RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 SPC24Q8NBT2 197 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 WDR36Q8NI36 951 aaKnown RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 WDR48Q8TAF3 677 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 ACTL9Q8TC94 416 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 HTR3CQ8WXA8 447 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 LIN37Q96GY3 246 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-204ENST00000430682 NUDT22Q9BRQ3 303 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 HAUS2Q9NVX0 235 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 TBC1D29Q9UFV1 150 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 SLC23A2Q9UGH3 650 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 ZNHIT2Q9UHR6 403 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
SMPD4-204ENST00000430682 RGSL1A5PLK6 1076 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 A6NCN8 305 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 APOC4-APOC2K7ER74 178 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 GPR39O43194 453 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 BUD23O43709 281 aaKnown RBP12.39□□□□□ -0.43
SMPD4-204ENST00000430682 MTX2O75431 263 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 APOC2P02655 101 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-204ENST00000430682 ITIH1P19827 911 aa12.39□□□□□ -0.43
SMPD4-204ENST00000430682 ALDH4A1P30038 563 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms