RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CLDN7O95471 211 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 ASMTLO95671 621 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 PRLP01236 227 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 HLA-DQB2P05538 268 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 MAN1A1P33908 653 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 GJC1P36383 396 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 ARSDP51689 593 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 EPHA4P54764 986 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 UBASH3AP57075 661 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 HHEXQ03014 270 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 DCAF12Q5T6F0 453 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 SLC9B2Q86UD5 537 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 IL22RA1Q8N6P7 574 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 CCHCR1Q8TD31 782 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 HTR3CQ8WXA8 447 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 NKD1Q969G9 470 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 SH3KBP1Q96B97 665 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 ZNF830Q96NB3 372 aaPredicted RBP14.77□□□□□ -0.05
MSH5-208ENST00000429846 SMIM14Q96QK8 99 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 AGAP2Q99490 1192 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 EPB41L1Q9H4G0 881 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 SLC39A1Q9NY26 324 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 B3GALT1Q9Y5Z6 326 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 KIR2DS5A0A0G2JLQ3 304 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 A0A0G2JNG1 304 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 KIR2DS3K7RE56 304 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 CAPN5O15484 640 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 PPFIA2O75334 1257 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 MAP3K6O95382 1288 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 WISP1O95388 367 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 H2AFZP0C0S5 128 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 FAM87AP0C7U9 286 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ITGB6P18564 788 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 WT1P19544 449 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 UGT1A3P35503 534 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 SPINT3P49223 89 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 KCNC4Q03721 635 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 IHHQ14623 411 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 KIR2DS5Q14953 304 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 TBR1Q16650 682 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 H2AFVQ71UI9 128 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 VSIG1Q86XK7 387 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 FAM129CQ86XR2 697 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 CCDC13Q8IYE1 715 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.76□□□□□ -0.05
MSH5-208ENST00000429846 CTNNBL1Q8WYA6 563 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 PMEPA1Q969W9 287 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ZPBPQ9BS86 351 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 MLPHQ9BV36 600 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 SLC12A9Q9BXP2 914 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ADGRE3Q9BY15 652 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.76□□□□□ -0.05
MSH5-208ENST00000429846 ADNPQ9H2P0 1102 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 FAM83DQ9H4H8 585 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 TMEM9Q9P0T7 183 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 ZNHIT2Q9UHR6 403 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 NENFQ9UMX5 172 aa14.76□□□□□ -0.05
MSH5-208ENST00000429846 OR5K4A6NMS3 321 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 EFCAB7A8K855 629 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 ZNF487B1APH4 448 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 ANKRD66B4E2M5 251 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 GPR89AB7ZAQ6 455 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 GYPCP04921 128 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 ATP1A1P05023 1023 aaKnown RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 GPR89BP0CG08 455 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 F3P13726 295 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 PPM1FP49593 454 aaPredicted RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 CSRP3P50461 194 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 GBE1Q04446 702 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 PPIDQ08752 370 aaKnown RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 NIPAL4Q0D2K0 466 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 IYDQ6PHW0 289 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 ATG14Q6ZNE5 492 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 LYSMD3Q7Z3D4 306 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 LUZP1Q86V48 1076 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 PHYKPLQ8IUZ5 450 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CACNA2D3Q8IZS8 1091 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 PQLC3Q8N755 202 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 BMPERQ8N8U9 685 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CCNYQ8ND76 341 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CPLX3Q8WVH0 158 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 JPH3Q8WXH2 748 aaPredicted RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 WDR24Q96S15 920 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CARD9Q9H257 536 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CBX8Q9HC52 389 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 GEMIN8Q9NWZ8 242 aaKnown RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 DTLQ9NZJ0 730 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 TBC1D29Q9UFV1 150 aa14.75□□□□□ -0.05
MSH5-208ENST00000429846 CNOT6Q9ULM6 557 aaKnown RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 OAS3Q9Y6K5 1087 aaKnown RBP14.75□□□□□ -0.05
MSH5-208ENST00000429846 A6NCN8 305 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ZNF891A8MT65 544 aaPredicted RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 FADS2P1A8MWK0 482 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 GOLGA6L19H0YKK7 550 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 TERTO14746 1132 aaKnown RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 NUAK1O60285 661 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms