RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GNPDA1P46926 289 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 UBAP2LQ14157 1087 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 PAN2Q504Q3 1202 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 GLB1L3Q8NCI6 653 aaPredicted RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 CENPNQ96H22 339 aaPredicted RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SNX15Q9NRS6 342 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 CLUP10909 449 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 NR2C1P13056 603 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 PVALBP20472 110 aaPredicted RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 GMPSP49915 693 aaPredicted RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 MCEMP1Q8IX19 187 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 CYP4X1Q8N118 509 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 PTCH2Q9Y6C5 1203 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 A0A0J9YYE9 177 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 KERAO60938 352 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 FRRS1Q6ZNA5 592 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 BBS12Q6ZW61 710 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 RCN3Q96D15 328 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 UNKQ9C0B0 810 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 PRLP01236 227 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 RAPSNQ13702 412 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 FBXO43Q4G163 708 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 MFSD5Q6N075 450 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SLC16A10Q8TF71 515 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SSU72Q9NP77 194 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 CFL2Q9Y281 166 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 KCNIP3Q9Y2W7 256 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SLC22A1O15245 554 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 TM7SF2O76062 418 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 AP2A2O94973 939 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 RPLP0P05388 317 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 RORCP51449 518 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 TUBA1BP68363 451 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 TUBA1AQ71U36 451 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 ADAMTS15Q8TE58 950 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 ADARB2Q9NS39 739 aaKnown RBP14.38□□□□□ -0.11
PTPN13-203ENST00000427191 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
PTPN13-203ENST00000427191 A0A087X0B3 334 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 LACTBL1A8MY62 500 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 UBXN7O94888 489 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 CALCAP01258 141 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 RARRES1P49788 294 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC12A3P55017 1021 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 BTG3Q14201 252 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ACAP2Q15057 778 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 CERS6Q6ZMG9 384 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 RNF19BQ6ZMZ0 732 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 C11orf65Q8NCR3 313 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 KLHL5Q96PQ7 755 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SPATC1LQ9H0A9 340 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PLCL2Q9UPR0 1127 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 NRCAMQ92823 1304 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ELOVL7A1L3X0 281 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ARP10275 920 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 LAMP2P13473 410 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 AKR1A1P14550 325 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 INSRRP14616 1297 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC9A4Q6AI14 798 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PNLDC1Q8NA58 520 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 DCAKDQ8WVC6 231 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 LGR4Q9BXB1 951 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 NUDT4Q9NZJ9 180 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SEC14L4Q9UDX3 406 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 A0A1B0GVC2 190 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 TBC1D3BA6NDS4 549 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 MRPL17Q9NRX2 175 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 CXCL11O14625 94 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 AIREO43918 545 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 DRD4P21917 467 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ABCA11PQ4W5N1 156 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SEZ6Q53EL9 994 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ANKRD26P1Q6NSI1 321 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 RAB11FIP2Q7L804 512 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 STRADAQ7RTN6 431 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 SDR16C5Q8N3Y7 309 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 NATD1Q8N6N6 113 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 OR4C6Q8NH72 309 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 NXPE2Q96DL1 559 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 LINGO1Q96FE5 620 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 AP1S3Q96PC3 154 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 COPS8Q99627 209 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PDP1Q9P0J1 537 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 MYH9P35579 1960 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PRAMEF33A0A0G2JMD5 474 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 FPGTO14772 594 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
PTPN13-203ENST00000427191 PRAMEF10O60809 474 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 ANGPTL1O95841 491 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 TPSB2P20231 275 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 RHEBQ15382 184 aa14.37□□□□□ -0.11
PTPN13-203ENST00000427191 TPSAB1Q15661 275 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms