RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ITGA8P53708 1063 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 SRP54P61011 504 aaKnown RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 IL9RQ01113 521 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 PEX6Q13608 980 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MORF4L2Q15014 288 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 ALG11Q2TAA5 492 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 HIBCHQ6NVY1 386 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 NLRP9Q7RTR0 991 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MMGT1Q8N4V1 131 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 BTN2A2Q8WVV5 523 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 OR1E3Q8WZA6 343 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 GLYATL1Q969I3 302 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TSACCQ96A04 125 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 CDKN2AIPNLQ96HQ2 116 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 FGF22Q9HCT0 170 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TM7SF3Q9NS93 570 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 KLQ9UEF7 1012 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 SLC2A6Q9UGQ3 507 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TMEM98Q9Y2Y6 226 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 OAS3Q9Y6K5 1087 aaKnown RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 RALGAPA1Q6GYQ0 2036 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 H7C0S8 307 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TNFRSF10CO14798 259 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TP73O15350 636 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 GPR39O43194 453 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 SRP72O76094 671 aaKnown RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 PRAMEF1O95521 474 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 ZNF883P0CG24 379 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 NME1P15531 152 aaKnown RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 CA5AP35218 305 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 POLD2P49005 469 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 CCT8P50990 548 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 ARSDP51689 593 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 PPARDQ03181 441 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 DUPD1Q68J44 220 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MICALCLQ6ZW33 695 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MPP5Q8N3R9 675 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 CEP112Q8N8E3 955 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 OR13J1Q8NGT2 312 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 ZNF398Q8TD17 642 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 TBATAQ96M53 351 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 VPS35Q96QK1 796 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 LRRC1Q9BTT6 524 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 SUDS3Q9H7L9 328 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MRPL40Q9NQ50 206 aaKnown RBP24.29■■□□□ 1.48
VEGFA-209ENST00000425836 SLC25A14O95258 325 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-209ENST00000425836 FUCA1P04066 466 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 JUNDP17535 347 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 LIMK1P53667 647 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 ACVR1Q04771 509 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 BNIP3Q12983 259 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 ITGA9Q13797 1035 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 UAP1L1Q3KQV9 507 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 DOK6Q6PKX4 331 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 HID1Q8IV36 788 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 NOA1Q8NC60 698 aaKnown RBP24.28■■□□□ 1.48
VEGFA-209ENST00000425836 PDXPQ96GD0 296 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 KIFC1Q9BW19 673 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 DPH5Q9H2P9 285 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 TCEAL2Q9H3H9 227 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-209ENST00000425836 ARFGAP3Q9NP61 516 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 ANAPC5Q9UJX4 755 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 SLC17A4Q9Y2C5 497 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 UTP11Q9Y3A2 253 aaKnown RBP24.28■■□□□ 1.48
VEGFA-209ENST00000425836 DGKBQ9Y6T7 804 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 FAM186AA6NE01 2351 aa24.28■■□□□ 1.48
VEGFA-209ENST00000425836 SDR42E2A6NKP2 422 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 SMAPO00193 183 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 YKT6O15498 198 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 EPHA8P29322 1005 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-209ENST00000425836 HK3P52790 923 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 ARHGAP8P85298 464 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 NFATC2Q13469 925 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 C8orf74Q6P047 294 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 RD3Q7Z3Z2 195 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 PHACTR4Q8IZ21 702 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 RBFAQ8N0V3 343 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 AGGF1Q8N302 714 aaeCLIP24.27■■□□□ 1.48
VEGFA-209ENST00000425836 SAP25Q8TEE9 199 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 PTCD2Q8WV60 388 aaKnown RBP24.27■■□□□ 1.48
VEGFA-209ENST00000425836 PEX13Q92968 403 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 CARD6Q9BX69 1037 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 ASB8Q9H765 288 aa24.27■■□□□ 1.48
VEGFA-209ENST00000425836 SDC3O75056 442 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 PIAS2O75928 621 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 RASGRP1O95267 797 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 MC4RP32245 332 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 HNRNPKP61978 463 aaKnown RBP eCLIP24.26■■□□□ 1.478e-7■■■■□ 21.9
VEGFA-209ENST00000425836 FNBP1LQ5T0N5 605 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 ZNF648Q5T619 568 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-209ENST00000425836 PHYKPLQ8IUZ5 450 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 BBOF1Q8ND07 529 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 NETO1Q8TDF5 533 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 HDAC10Q969S8 669 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 SIGLEC10Q96LC7 697 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 RAB17Q9H0T7 212 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 MRM3Q9HC36 420 aaKnown RBP24.26■■□□□ 1.47
VEGFA-209ENST00000425836 TRIM39Q9HCM9 518 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 CYP4F12Q9HCS2 524 aa24.26■■□□□ 1.47
VEGFA-209ENST00000425836 TREX1Q9NSU2 369 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms