RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 BCL2L1Q07817 233 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 PLEKHG6Q3KR16 790 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 SPRED2Q7Z698 418 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 EFHBQ8N7U6 833 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 SHKBP1Q8TBC3 707 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 MYO19Q96H55 970 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 CNDP1Q96KN2 507 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 C19orf43Q9BQ61 176 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 AARSD1Q9BTE6 412 aaKnown RBP16.48■□□□□ 0.23
CMTM3-202ENST00000424011 OBSL1O75147 1896 aa16.48■□□□□ 0.23
CMTM3-202ENST00000424011 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 GRXCR1A8MXD5 290 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 MATN2O00339 956 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SOCS5O75159 536 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 XYLBO75191 536 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 PGLSO95336 258 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 IGSF6O95976 241 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SLC25A3Q00325 362 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SEMA3AQ14563 771 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 ATXN7L2Q5T6C5 722 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 KBTBD2Q8IY47 623 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 ULK2Q8IYT8 1036 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 STON2Q8WXE9 905 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 PPP1R36Q96LQ0 422 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 TUBGCP5Q96RT8 1024 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SYTL2Q9HCH5 934 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 HCFC1R1Q9NWW0 138 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 PLK2Q9NYY3 685 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 DPP7Q9UHL4 492 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 GOLGA8QA0A0J9YX86 632 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 GOLGA8OA6NCC3 632 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 GOLGA8NF8WBI6 632 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 GRID2O43424 1007 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 DCXO43602 365 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SLC4A1P02730 911 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 RB1P06400 928 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 CCR2P41597 374 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 PDAP1Q13442 181 aaKnown RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 SHHQ15465 462 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 ZNF549Q6P9A3 640 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 TXNDC5Q8NBS9 432 aaKnown RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 NAT14Q8WUY8 206 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 TM6SF2Q9BZW4 377 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 POMKQ9H5K3 350 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 POLR3BQ9NW08 1133 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-202ENST00000424011 TAS2R13Q9NYV9 303 aa16.47■□□□□ 0.23
CMTM3-202ENST00000424011 NEMP2A6NFY4 417 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 K7ERQ8 282 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 HDAC3O15379 428 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 IPO13O94829 963 aaKnown RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 CSPG5O95196 566 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 PABPC4LP0CB38 370 aaKnown RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TFEBP19484 476 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 MC4RP32245 332 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 COPAP53621 1224 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 CAMK1Q14012 370 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 SEL1L3Q68CR1 1132 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TTC30BQ8N4P2 665 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 ANKRD49Q8WVL7 239 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 LPGAT1Q92604 370 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 GPR63Q9BZJ6 419 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 ATP13A3Q9H7F0 1226 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 EML4Q9HC35 981 aaKnown RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TCF7L2Q9NQB0 619 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TDP1Q9NUW8 608 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 SLC7A8Q9UHI5 535 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 ZNF711Q9Y462 761 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 LOC100653049A0A140TA62 436 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 UBA6A0AVT1 1052 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 NEMP1O14524 444 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 KRT34O76011 436 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 RHOP08100 348 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 CD70P32970 193 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 HMGCLP35914 325 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 SULT2A1Q06520 285 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TEAD2Q15562 447 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TRIM67Q6ZTA4 783 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 SPATA24Q86W54 205 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 PAF1Q8N7H5 531 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 ZBTB8BQ8NAP8 495 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-202ENST00000424011 ABHD8Q96I13 439 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 TBC1D14Q9P2M4 693 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 WDR37Q9Y2I8 494 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 COMMD10Q9Y6G5 202 aa16.46■□□□□ 0.23
CMTM3-202ENST00000424011 A0A088AWK7 358 aa16.45■□□□□ 0.22
CMTM3-202ENST00000424011 GRM6O15303 877 aa16.45■□□□□ 0.22
CMTM3-202ENST00000424011 HTRA2O43464 458 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-202ENST00000424011 RFPL2O75678 378 aa16.45■□□□□ 0.22
CMTM3-202ENST00000424011 SRP72O76094 671 aaKnown RBP16.45■□□□□ 0.22
CMTM3-202ENST00000424011 CA3P07451 260 aa16.45■□□□□ 0.22
CMTM3-202ENST00000424011 ZNF37AP17032 561 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-202ENST00000424011 EPHA3P29320 983 aa16.45■□□□□ 0.22
CMTM3-202ENST00000424011 SNRPD1P62314 119 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms