RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 OR1A2Q9Y585 309 aa15.62■□□□□ 0.09
DDX55-203ENST00000421670 FAM169AQ9Y6X4 670 aa15.62■□□□□ 0.09
DDX55-203ENST00000421670 ADAMTS9Q9P2N4 1935 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 FPGTO14772 594 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 ACSL3O95573 720 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 TSHRP16473 764 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 FOXN2P32314 431 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 NUDT1P36639 197 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 SLMAPQ14BN4 828 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 LONRF1Q17RB8 773 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 SPDYCQ5MJ68 293 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 PSAPL1Q6NUJ1 521 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 ZC3H14Q6PJT7 736 aaKnown RBP15.61■□□□□ 0.09
DDX55-203ENST00000421670 LAYNQ6UX15 382 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 TRIM74Q86UV6 250 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 HEATR4Q86WZ0 1026 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 RELL1Q8IUW5 271 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 PIANPQ8IYJ0 282 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 OR4L1Q8NH43 312 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 GSDMBQ8TAX9 411 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 AENQ8WTP8 325 aaKnown RBP15.61■□□□□ 0.09
DDX55-203ENST00000421670 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX55-203ENST00000421670 CERS2Q96G23 380 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 SEMA4AQ9H3S1 761 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 VPS37BQ9H9H4 285 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 ARFGAP3Q9NP61 516 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 AASDHPPTQ9NRN7 309 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 C20orf96Q9NUD7 363 aaPredicted RBP15.61■□□□□ 0.09
DDX55-203ENST00000421670 MARCH4Q9P2E8 410 aaPredicted RBP15.61■□□□□ 0.09
DDX55-203ENST00000421670 SLC30A1Q9Y6M5 507 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 RALGAPA1Q6GYQ0 2036 aa15.61■□□□□ 0.09
DDX55-203ENST00000421670 CACNA1EQ15878 2313 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 RHOBTB1O94844 696 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 F7P08709 466 aaPredicted RBP15.6■□□□□ 0.09
DDX55-203ENST00000421670 ERVK-10P10266 1014 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 ITGALP20701 1170 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 PTPN5P54829 565 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 ITGA9Q13797 1035 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 SEMA3AQ14563 771 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 HSP90AA5PQ58FG0 334 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 WDR45BQ5MNZ6 344 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 SNX20Q7Z614 316 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 KCNMB4Q86W47 210 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 OTUD6BQ8N6M0 293 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 ZNF398Q8TD17 642 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 DNASE2BQ8WZ79 361 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 BMFQ96LC9 184 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 PRRX2Q99811 253 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 TXLNGYQ9BZA5 131 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 WDR26Q9H7D7 661 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 TM9SF3Q9HD45 589 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 PPANQ9NQ55 473 aaKnown RBP15.6■□□□□ 0.09
DDX55-203ENST00000421670 CATSPERZQ9NTU4 200 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 SLC17A6Q9P2U8 582 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 TMPRSS11EQ9UL52 423 aa15.6■□□□□ 0.09
DDX55-203ENST00000421670 TCRBV9S1A1TA0A576 114 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 PIAS1O75925 651 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 PMS2P54278 862 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 CACNG1Q06432 222 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 STAT4Q14765 748 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 ZNF470Q6ECI4 717 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 ADAMTSL4Q6UY14 1074 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 C3orf62Q6ZUJ4 267 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 LDB1Q86U70 411 aaPredicted RBP15.59■□□□□ 0.09
DDX55-203ENST00000421670 NLRP8Q86W28 1048 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 OR13H1Q8NG92 308 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 C1orf216Q8TAB5 229 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 FUBP1Q96AE4 644 aaKnown RBP15.59■□□□□ 0.09
DDX55-203ENST00000421670 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
DDX55-203ENST00000421670 LGR4Q9BXB1 951 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 CRLS1Q9UJA2 301 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 CNOT6Q9ULM6 557 aaKnown RBP15.59■□□□□ 0.09
DDX55-203ENST00000421670 KNL1Q8NG31 2342 aa15.59■□□□□ 0.09
DDX55-203ENST00000421670 TDRD6O60522 2096 aaKnown RBP15.59■□□□□ 0.09
DDX55-203ENST00000421670 ZFC3H1O60293 1989 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 A6NNZ2 444 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 CD3EAPO15446 510 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 MTX2O75431 263 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 TUBBP07437 444 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 TRIM23P36406 574 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 CDK3Q00526 305 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 THOC5Q13769 683 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 FASTKD1Q53R41 847 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 ZNF648Q5T619 568 aaPredicted RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 PDPK2PQ6A1A2 396 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 KYAT3Q6YP21 454 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 TAS2R42Q7RTR8 314 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 ABI3BPQ7Z7G0 1075 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 PHYKPLQ8IUZ5 450 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 GDAP1Q8TB36 358 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 GLYATL1Q969I3 302 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 TTC25Q96NG3 672 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 VPS35Q96QK1 796 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 IARS2Q9NSE4 1012 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 TMEM74BQ9NUR3 256 aa15.58■□□□□ 0.09
DDX55-203ENST00000421670 OAS3Q9Y6K5 1087 aaKnown RBP15.58■□□□□ 0.09
DDX55-203ENST00000421670 GPR179Q6PRD1 2367 aa15.58■□□□□ 0.08
DDX55-203ENST00000421670 TRBV5-4A0A0C4DH59 114 aa15.58■□□□□ 0.08
DDX55-203ENST00000421670 AGAP14A8MT82 685 aa15.58■□□□□ 0.08
DDX55-203ENST00000421670 SLC25A14O95258 325 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms