RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 TWIST2Q8WVJ9 160 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 TUBB1Q9H4B7 451 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 FBRSL1Q9HCM7 1045 aaKnown RBP18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 CCDC167Q9P0B6 97 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 IL17CQ9P0M4 197 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 SUCOQ9UBS9 1254 aaKnown RBP18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 VPS51Q9UID3 782 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 INSL5Q9Y5Q6 135 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 COMMD10Q9Y6G5 202 aa18.83■□□□□ 0.6
CROCCP3-202ENST00000420820 ATP6AP2A0A1C7CYW4 349 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 SYCE1LA8MT33 242 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 CDC7O00311 574 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 OR1I1O60431 355 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 VPS26AO75436 327 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 ATP6AP2O75787 350 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 HDCP19113 662 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EEF1DP29692 281 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 RPL26P61254 145 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 TLE2Q04725 743 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 CAPRIN2Q6IMN6 1127 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 APLFQ8IW19 511 aaPredicted RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 CD200R1Q8TD46 325 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 KCNJ9Q92806 393 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 TMEM169Q96HH4 297 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EBF3Q9H4W6 596 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 TBX21Q9UL17 535 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 MAFFQ9ULX9 164 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 ZNF106Q9H2Y7 1883 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 SCN8AQ9UQD0 1980 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 SUPT3HB4E1H0 165 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 E7ENX8 843 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 PRRG1O14668 218 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 PIP5K1BO14986 540 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 PFDN6O15212 129 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 NRP2O60462 931 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 SUPT3HO75486 399 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 MSX2P35548 267 aaPredicted RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EPHB3P54753 998 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 TRIP10Q15642 601 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EML3Q32P44 896 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 AARS2Q5JTZ9 985 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 OR52E8Q6IFG1 317 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 PAOXQ6QHF9 649 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 DDX53Q86TM3 631 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 DNAJC5GQ8N7S2 189 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EFHBQ8N7U6 833 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 DCAF4L2Q8NA75 395 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 BHLHE22Q8NFJ8 381 aaPredicted RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 WFDC5Q8TCV5 224 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 TRPC4APQ8TEL6 797 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 ZNF483Q8TF39 744 aaPredicted RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 EID2BQ96D98 161 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 ASB9Q96DX5 294 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 P2RY12Q9H244 342 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 MAGEE1Q9HCI5 957 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 BPIFA1Q9NP55 256 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 MRPL40Q9NQ50 206 aaKnown RBP18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 CD300AQ9UGN4 299 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 RIMS3Q9UJD0 308 aa18.82■□□□□ 0.6
CROCCP3-202ENST00000420820 A0A1B0GTL3 188 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 PRSS51A0A1B0GVH4 220 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 NIPSNAP2O75323 286 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 PIM1P11309 404 aaPredicted RBP18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 CSKP41240 450 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 PTGER3P43115 390 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 RHOAP61586 193 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 TRIM60Q495X7 471 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 ANKS6Q68DC2 871 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 PCDH20Q8N6Y1 951 aaKnown RBP18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 RNF148Q8N7C7 305 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 OR9I1Q8NGQ6 314 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 PIH1D2Q8WWB5 315 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 C19orf43Q9BQ61 176 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 TMCO1Q9UM00 188 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 FCF1Q9Y324 198 aaKnown RBP18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 ZNF711Q9Y462 761 aa18.81■□□□□ 0.6
CROCCP3-202ENST00000420820 NPEPPSL1A6NEC2 478 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PRAMEF12O95522 483 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 MT-CO1P00395 513 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 ESR1P03372 595 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 HMGCLP35914 325 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 AQP4P55087 323 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 AP1S1P61966 158 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 MRPS22P82650 360 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 TRIM25Q14258 630 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 LRRC36Q1X8D7 754 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 MMEL1Q495T6 779 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 ZRANB3Q5FWF4 1079 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 TXNDC11Q6PKC3 985 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 ARL14EPQ8N8R7 260 aaPredicted RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 SIDT2Q8NBJ9 832 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 KLHL32Q96NJ5 620 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 KCNA7Q96RP8 456 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 BEGAINQ9BUH8 593 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 VCXQ9H320 206 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 DLGAP2Q9P1A6 1054 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 TMEM181Q9P2C4 612 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 SCOCQ9UIL1 159 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 TRMT6Q9UJA5 497 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms